Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7bn9B_

Fold library idPDB HeaderMoleculeTitle
c7bn9B_2.65PDB header: hydrolaseChain: B: PDB Molecule: penicillin-binding protein 3;


Added to library: Sat Mar 5 10:32:10 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence WNDQQFDDMYQSLTKDVKKEISKKDFVNRYKAIYEQAGVSMNTNAGKVSFKDWDPSFIFKQLADDKTVQI
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP)



TT


GGGS
S
TSS



SSS






GGGT
TT
BTTB


 .........80.........90.........100.........110.........120.........130.........140
Sequence MSIEPKRGQIYDKNGKGLAVNTDVPEIGIVPGELGDKKEKVIKELAKKLDLTEDDIKKKLDQGWVKDDSF
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)






TT


TT
TT

SSTT

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VPLKKVKPDQEKLVSEATSLQGVTRTNVSSRYYPYGEKTAHLTGYVRAITAEELKKKKEGTYSDTSNIGI
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)

TT
TSTT
TTGGGS


TTS
TTT

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence AGLENVYEDKLRGTTGWKIYVPQTGEVIAEKKAKDGEDLHLTIDIKTQMKLYDELKDDSGAAVALQPKTG
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) TT




SSS


S






BS

TTSS
TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence ETLALVSAPSYDPNGFIFGWSDKEWKKLNKDKNNPFSAKFNKTYAPGSTIKPIAAAIGIKNGTLKADEKK
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) BS


TS



TT
TTS
STTS
B

GGGTS

TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TIKGKEWQKDSSWGGYSVTRVSERLQQVDLENALITSDNIYFAQNALDMGADTFTKGLKTFGFSEDVPYE
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)

SS
SSGGGTT


S



S
T

TTTTS



S
 .........430.........440.........450.........460.........470.........480.........490
Sequence FPIQKSSIANDKLDSDILLADTGYGQGQMQMSPLHLATAYTPFVDNGDLVKPTLIKKDSQTADVWHKQVV
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP) S




BS
SS


ST
SS
BB
GGGTSS



B
B

SS



S
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence TKEGAADITKGLKGVVEDERGSAYQPVVKGITVAGKTGTAELGTENGWFVGYDYENKDLLVAMMIQNVQD
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)
STT
TT
SS

SS




TTT


S

TT
 .........570........
Sequence RGGSHYVVEKAKKQFQSN
Predicted secondary structure





SS confidence

















Known secondary structure (DSSP) TTTTTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D