Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7bjtB_

Fold library idPDB HeaderMoleculeTitle
c7bjtB_1.42PDB header: hydrolaseChain: B: PDB Molecule: alginate lyase, family pl17;


Added to library: Sat Jul 17 08:33:26 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AQEHPSLILTKAGVEKIRAELGNIPIFDATLEKVKAEVDAEIALGIDTPLPKDYSGGYTHERHKRNFFIL
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)


SS
SSS
TTS










TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence QKAGVLYQILNDEKYALYIKDMLFQYEGMYKDLPVHPQTRSYARGKLFWQCLNDSNWLVYVSQAYDCVYD
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) T
TT

S
S



TT

SSSSSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YLSKKERKQLEKNLFRPFADYISIENPQFYNRVHNHSTWGNAAVGMIGLVMGDEELIQRALYGIEDDGLP
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TS
TTTTT
SSSST


SS



 .........220.........230.........240.........250.........260.........270.........280
Sequence IGAKDNDGGFIKVEGQKAGFLANIDEPFSPDGYYTEGPYYQRYAMYPFLIFAEALHNVRPQQKIFEHKDG
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) TT
B
SSS
BS

TT


STTB
TT

BTT

GGG
GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence VLLKSVNTLLSLSDADGEFFPLNDAQKGMSYHSRELVTAVDIAYHYGNHNPQLLSIAEEQGQVLLDDSGL
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) TB
TTSBB


SS

TT
BTTSTT

T


SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence AVALGIREGKSEDFQKKSIKLSDGANGDQGGVAILRYGNEAMTLVYKYAAQGLSHGHYDKLSFSLYEKGT
Predicted secondary structure















































SS confidence





































































Known secondary structure (DSSP) TT









STTS
S
TTTT
B

GGG

S
TTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence EILQDYGLARFVNIEQKGGGNYLKENTTWAKQTIAHNTLVQNETSHFEGKYEVGSQHHSELYFFDASNPE
Predicted secondary structure























































SS confidence





































































Known secondary structure (DSSP)




S

TT
TTTGGGS

TTTSGGGSSS
TTB
GGGG
TT
B
TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence VQVVSAKEQNAYPGTEMHRTMALIKTDGFEKPFVLDILRVGSNAANQYDLPFYFKGQVMQTNFDFTTPKS
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) SSSSTT

TT
SS
SS

B
SSS


SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence LEPLGSDNGYQHLWSEGLGQPKGDNSQLSWLENGRFYTLTTATNNDDELHFVRIGANDPEFNLRRDAGLI
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)

BS
SSTTGGG

SSSTT

TT

TT
TT

S


 .........640.........650.........660.........670.........680.........690.........700
Sequence IRRKNTKNTTFVSILESHGHYSPVSEFSVNANSSISKIELMLDTKEYTAVLIDAKSNTEQTLLILANENK
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP) SS

TTT

S
S


SSSSTT
SS

 .........710.........720.......
Sequence NVNKEHIIEIKGKEYRWTGPYQFIKIN
Predicted secondary structure








SS confidence


























Known secondary structure (DSSP)
TT
TTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D