Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7bjpA_

Fold library idPDB HeaderMoleculeTitle
c7bjpA_3.80PDB header: viral proteinChain: A: PDB Molecule: capsid protein;


Added to library: Sat Apr 17 08:26:24 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PDITGEEQGVAVATGTQPSAPAMATLATAATGTMPEEWKTFFSYYTTVNWSTTDETGKVLFVQGLSPRMN
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP)




SS






S



S


S
GGGTS
TT

TT
SSGGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PFLDHLAKMYTGWSGSMEIRFTISGSGVFGGKLAAVMVPPGIGTEGGTSLLQFPHVLVDARQTEPVIFNI
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) GGGBSS


TT

TTS



SGGGGGSSTT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence PDIRTVLWHDMHDTLTAHLVILVYNDLLNPYQTSCTVTVETRGGTDFEFHLLKPPSRKMIFGADPSRLIP
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)



SSSSTT
SS


S



TT

SB

TTS
SGGG

TTSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KKSMFWEGNRLPGEFKGFSIKPLVFQANRHFDCKRQTFGWSTPEHAGVKLNIQRQNLDTEDKTDIGVHLV
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP) SBGGG

BSSS



S

TT


TTS


SS

TT
S

S

TT

SSSS


 .........290.........300.........310.........320.........330.........340.........350
Sequence TGLKTIKSQVPDGWPDYYGRNIILANTTASFGEVSEAMLGTVVPYRVSGKLEWRHLPEIAFANGTAKNST
Predicted secondary structure






















































SS confidence





































































Known secondary structure (DSSP) S

SSSS

TT

SB

SSB


STTS



SS





SSS
S

S


B
SSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence IVCGKYLTGNFYVGGNFTQQGNVVVYPAFWTSKHGDTKCIGEDEDMVKRIDVLPQAQTTGGNYPIYYVTE
Predicted secondary structure

















































SS confidence





































































Known secondary structure (DSSP) BB

SBTTSS


S
B


TT



BT

TTTB
BSS



BTTB
 .........430.........440.........450.........460.........470.........480.........490
Sequence FPAAYLPAPRVYNSQLLWTSRLLAQDVYDIGPEALAVFKIKDSAGNWFDIGISCEGFSFVGAPTLPFSSL
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP)

BSSSSS

SSBSTTTSS




TT
SSS

TT

S
S


GGG
 .........500.........510...
Sequence QFPLEASYVGMASAYNKLQHNIA
Predicted secondary structure







SS confidence






















Known secondary structure (DSSP)
SS
TTS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D