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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7bc4B_

Fold library idPDB HeaderMoleculeTitle
c7bc4B_3.10PDB header: biosynthetic proteinChain: B: PDB Molecule: fatty acid synthase subunit beta;


Added to library: Sat May 22 09:48:32 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RPLVLNHGSIESTILIPTTEYHFYQTLLEGFRKSLPQVTEGFADDDEPSSKAELLMKFLGYIVQSGVSNQ
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Known secondary structure (DSSP)



BTTB





S

S



TTT

SSS

SS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence QEQLAAAKLVLNEFESRFLQGLNLHSYAAILLKSETFPTTLLKIKENLIKNYYLGRALVYLPGQRGLVYP
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Known secondary structure (DSSP) TSSSS
S
TTS


TTSSSS

S




 .........150.........160.........170.........180.........190.........200.........210
Sequence PSALLNAGKSGSAQIYAIFGGQGNTDDYFEELRDIYHIYQGLVSDFVTKAQLKLQELIRTTPETDRIYTQ
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Known secondary structure (DSSP)

SSS



SSS
S

TTTTTTTTTSSSSS


S
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GLDLINWLENKDKTPDQQQLLSIPMSCPLICVIQLCHYIVTCRILGITPGQLRDSLKGTTGHSQGLVTAV
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Known secondary structure (DSSP)



TTSS

SSSSSSGGGTTT

TT
SSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VVSSADSWESFEKLALQAVEFMFYIGVRGLQTYPNTSLPPSIVQDSEENAEGTPSPMLSVRDLSYDQLVK
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Known secondary structure (DSSP)

SSS





TT

S

SS

TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence FVNETNQHLPEAKHIDISLINGPRNVVLTGPPQSLYGLNLNLRKAKAPSGLDQARIPFSERKLRFSNRFL
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Known secondary structure (DSSP) TTS
SSS

TTS
TTB

TT


SSS
TTS

B


 .........430.........440.........450.........460.........470.........480.........490
Sequence PIMSPFHSHLLSPSTEKIVADLKKAGVEFSQSSMKLPVFDTYDGKDLRSYSGSIAARLVECITKLRVNWE
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Known secondary structure (DSSP) S

S

SSTTTTTSSTTTT



SSS

S

B
SSS

BSTT

S
TS
 .........500.........510.........520.........530.........540.........550.........560
Sequence LSTEFNSTHVLDFGPGGASGLGVLTHRNKEGTGSRVIVAGVLDAESEDSEFGYKQEIFESNEKAIKYAPN
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Known secondary structure (DSSP) S
S

S

SSSTTSSSGGGTTSS

S






SSSB

GGGT

SSGGG





 .........570.........580.........590.........600.........610.........620.........630
Sequence WLKEYKPKLVKTSAGKIFVDTKFSRLLGRAPLMVPGMTPTTVSPDFVAATLNAGFHTEIAGGGYFAPSIM
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Known secondary structure (DSSP) T


TTS

SS
S



TTTSS
TT
B

STT

S
 .........640.........650.........660.........670.........680.........690.........700
Sequence KAALQRVIDQVTPGTGVGINLIYVNPRMLQWGIPMIKELREQGFPIQSLSIGAGVPSLEVATEYIETLGL
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Known secondary structure (DSSP) TS
TT

B
TT



B
SS


TTS

 .........710.........720.........730.........740.........750.........760.........770
Sequence AHLGLKPGSIDAVNQVITIAKAHPNFPIVLQWTGGRGGGHHSFEDFHQPILQMYSKIRKCKNIILIAGSG
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Known secondary structure (DSSP) S


SSTT
TTS


SSSSSS

SS
STTSTT

SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence FGSAEDTYPYLTGSWSHQFSYPSMPFDGVLFGSRVMTAKEAKTSPAAKQAIADCTGVDNSQWENTYKKPT
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Known secondary structure (DSSP)

SSTTGGGGT





S

STTSTTBSS

S
SS

B
SSTTGGGTTS
S
 .........850.........860.........870.........880.........890.........900.........910
Sequence GGIITVRSEMGEPIHKIATRGVMLWKELDDTIFTLPKNKMLEAIAKKKDYIIKKLNADYQKPWFAKNEKG
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Known secondary structure (DSSP) SS

SSS



TTTTTS
S
SS
B

B
SSS
 .........920.........930.........940.........950.........960.........970.........980
Sequence TCDLEDMTYKQIAERLVELMYVRKSQRWIDVTLRNFTGKFLRRIEERFATKVGTISLIQNFSQLEEPEKA
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Known secondary structure (DSSP) B

GGGSBTTTTS
T

SS



S
SSGGGGGS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence IDSVFKAYPEAASQLINEEDCDWFLLEAQSPTQKPVPFIPVLDERFEFFFKKDSLWQSEDLEAVVGEDVQ
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Known secondary structure (DSSP) SGGGGTSB

T
SSS


SSB


STTSSS
SGGGT

SSSGGG
GG
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence RTCILHGPVAAQFSNKVDEPIKDILENIHKGHIKSLVKEVYNGDESKIPVVEYFSSVDSFSDTAIEGVKI
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Known secondary structure (DSSP) GS




SBS
SSTT

SB
TSTT
GGGS
B
SS







S


SS

 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence ERSRNTETFTVTSGNVDNQQWFDLLAGKELSWRRAFITAARLVQGTNFVSNPAHSVLAPSKDLVVKIENG
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Known secondary structure (DSSP)
SS



SS


S
SS
ST
S
SSS


TT


TT
SST
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence SDAKKTVLTAFQRVRGKYVPAVSLKSIGDLKIKLELIETRTADKSAVALELFYNYKPTDGFAPILEVMEG
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Known secondary structure (DSSP) TTSTT
TT

SSS


SSS


TT
SSS


TT
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence RNTSIKNFYWKLWFGSSVPVDLDFDANKPISGGEASVSSQAIAEFTHAVGNSCEDFVPRAGRPQLAPMDF
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Known secondary structure (DSSP) S
SSS






TTS


T


GGGS

SSS


GGG
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence AIVLGWKAIMKAIFPKTVDGDILKLVHLSNGYKMFPGADPLKKGDVVSTVAHIRSVVNGETGKTVEVVGV
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Known secondary structure (DSSP) TGGGS
SSSS


GGG
TT


TT


SSS
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence ISRDGKPVLEVNSQFFYRGKYQDFGNSFKKTTETPVQVAFKSAKDIAVLKSKEWFHLEKDIDLLNQTLTF
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Known secondary structure (DSSP) TT
S




SS






ST
TT
S



TT
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence RCESYVKFKSSTVFASVKTTGQALLELPSKEIIQVAEINYESGSSYGNPVLDYLTRHGSTIEQPIMFENA
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Known secondary structure (DSSP)

SSSSS

TTT


S
SS


S

 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence IPLAQGTELTSKAPGTNETYAAVSGDYNPIHVNKVFASYANLPGTITHGMYSSAAVRALVEQWAAQNVAT
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Known secondary structure (DSSP) SSTT


B



S
STT



TTTT
TT
SSS


TSSS
GG
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence RVRAFKADFVGMVLPNDELVTHLEHVGMINGRKIIKVETKKVETEEVVLIGEAEIEQPVSTFVFTGQGSQ
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Known secondary structure (DSSP) G
S


SS




TTTTT







TT

 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence EQGMGMDLYNSSEVAKSVWDRADVHFINNYGFSILDIVKNNPTELTVHFGGAKGRSIRNNYISMMFETVA
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Known secondary structure (DSSP)
TTTT
STTSS
S

S

ST




 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence ADGQLKSEKIFKEINEDTISFTFKSPTGLLSATQFTQPALTLMEKASFEDMKSKGLVPSESMFAGHSLGE
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Known secondary structure (DSSP) SSS



S
TT

TT


TT
GGGSTT
S
SS
SSS
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence YSALTSLGDVMPIESLVDVVFYRGMTMQVAVPRDEQGRSNYGMIAVNPSRVSSTFNDSALRFVVEHIAQQ
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Known secondary structure (DSSP) TTTS

S
TTSSS


SSS

S
TTTS
TT

S
 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence TGWLLEIVNYNVENTQYVAAGDLRGLDTLSNVLNVFKIQKIDIVKLQETISLDEVKVHLSEIVDEVSKKS
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Known secondary structure (DSSP) S
S
TTTTTTTTTTTTTTTS



STTT


SS

T
 .........1970.........1980.........1990.........2000.........2010.........2020.........2030
Sequence SSKPQPIDLERGFACIPLKGISVPFHSSYLRSGVKPFQTFLCKKIPKSAVKPANLIGKYIPNLTAKPFQL
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Known secondary structure (DSSP) S
SS




TTT
B


S

S
TTSSTTSTTTTTS
TTT

STTTTTTB

SSS
S



 .........2040.........2050....
Sequence TKEYFEDVYELTKSEKIKHILDHW
Predicted secondary structure





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Known secondary structure (DSSP)
TT

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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