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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7bamB_

Fold library idPDB HeaderMoleculeTitle
c7bamB_3.50PDB header: membrane proteinChain: B: PDB Molecule: teneurin-4;


Added to library: Sat Dec 4 09:14:26 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence METACGDSKDNDGDGLVDCMDPDCCLQPLCHINPLCLGSPNPLDIIQETQVPVSQQNLHSFYDRIKFLVG
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Known secondary structure (DSSP)




SSSS
TTSSS

GGGSGGGGGSTTTTT
TTT




TT

S


SS
S
SSGGGGGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RDSTHIIPGENPFDGGHACVIRGQVMTSDGTPLVGVNISFVNNPLFGYTISRQDGSFDLVTNGGISIILR
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Known secondary structure (DSSP) TTSSSB
SSS
SS
SS

SS

B



TT
GGG


TTSSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence FERAPFITQEHTLWLPWDRFFVMETIIMRHEENEIPSCDLSNFARPNPVVSPSPLTSFASSCAEKGPIVP
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Known secondary structure (DSSP)
TTS





SSS



S


TTTT




SS







S
S



TTT
SG
 .........220.........230.........240.........250.........260.........270.........280
Sequence EIQALQEEISISGCKMRLSYLSSRTPGYKSVLRISLTHPTIPFNLMKVHLMVAVEGRLFRKWFAAAPDLS
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Known secondary structure (DSSP) GGT
SSSS
TTSSTT




S


TT

TTS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YYFIWDKTDVYNQKVFGLSEAFVSVGYEYESCPDLILWEKRTTVLQGYEIDASKLGGWSLDKHHALNIQS
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Known secondary structure (DSSP)
SB
TTS
B
BS
SS
SS


B



S
BTTBTT

TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence GILHKGNGENQFVSQQPPVIGSIMGNGRRRSISCPSCNGLADGNKLLAPVALTCGSDGSLYVGDFNYIRR
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Known secondary structure (DSSP) T
TTS
GGGS



SB

S



SS
TT
SSTT


S




TTS

SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence IFPSGNVTNILELRNKDFRHSHSPAHKYYLATDPMSGAVFLSDSNSRRVFKIKSTVVVKDLVKNSEVVAG
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Known secondary structure (DSSP)
TTS
SS

SGGGGSGGG



SSS



SSSS


S

S
TTT




 .........500.........510.........520.........530.........540.........550.........560
Sequence TGDQCLRCGDGGKATEATLTNPRGITVDKFGLIYFVDGTMIRRIDQNGIISTLLGSLSCDSVMDISQVHL
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Known secondary structure (DSSP)
S




TTTTSB
SS


S

TTS
TT

B
TT
B


SB




SS
GGG


 .........570.........580.........590.........600.........610.........620.........630
Sequence EWPTDLAINPMDNSLYVLDNNVVLQISENHQVRIVAGRPMHCLLSKVAIHATLESATALAVSHNGVLYIA
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Known secondary structure (DSSP)
S

TTTT
SS

TTS


S



SS
TTTS


S
TTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence ETDEKKINRIRQVTTSGEISLVAGAPSGCDCKNDANCDCFSGDDGYAKDAKLNTPSSLAVCADGELYVAD
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Known secondary structure (DSSP)
SSS

SSS




SS
TTT
SSS


B
TTSBGGG
B



TTS
 .........710.........720.........730.........740.........750.........760.........770
Sequence LGNIRIRFIRKNKPFLNTQNMYELSSPIDQELYLFDTTGKHLYTQSLPTGDYLYNFTYTGDGDITLITDN
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Known secondary structure (DSSP) TTTT




TTS
TTTT
TTS
TTT


TTS
T
 .........780.........790.........800.........810.........820.........830.........840
Sequence NGNMVNVRRDSTGMPLWLVVPDGQVYWVTMGTNSALKSVTTQGHELAMMTYHGNSGLLATKSNENGWTTF
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Known secondary structure (DSSP) T


SSS

TT


TTS

SSSSTTT


TT

 .........850.........860.........870.........880.........890.........900.........910
Sequence YEYDSFGRLTNVTFPTGQVSSFRSDTDSSVHVQVETSSKDDVTITTNLSASGAFYTLLQDQVRNSYYIGA
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Known secondary structure (DSSP)
TTS

TTS
SSS
TTS


SSTTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence DGSLRLLLANGMEVALQTEPHLLAGTVNPTVGKRNVTLPIDNGLNLVEWRQRKEQARGQVTVFGRRLRVH
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Known secondary structure (DSSP) TS

TTS


TT
SS



SSSS

SSST
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence NRNLLSLDFDRVTRTEKIYDDHRKFTLRILYDQAGRPSLWSPSSRLNGVNVTYSPGGYIAGIQRGIMSER
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Known secondary structure (DSSP) TTTTTTT
S

TTS
STT



TTS
TT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence MEYDQAGRITSRIFADGKTWSYTYLEKSMVLLLHSQRQYIFEFDKNDRLSSVTMPNVARQTLETIRSVGY
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Known secondary structure (DSSP)
TTS
TTS
TT
TT


TTS

SSS

SSS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence YRNIYQPPEGNASVIQDFTEDGHLLHTFYLGTGRRVIYKYGKLSKLAETLYDTTKVSFTYDETAGMLKTI
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Known secondary structure (DSSP)
SSSS


TT

TTTT
TTS

SS

TTT

 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence NLQNEGFTCTIRYRQIGPLIDRQIFRFTEEGMVNARFDYNYDNSFRVTSMQAVINETPLPIDLYRYDDVS
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Known secondary structure (DSSP)
SS
TT
STT



SSSSTT



TTT
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence GKTEQFGKFGVIYYDINQIITTAVMTHTKHFDAYGRMKEVQYEIFRSLMYWMTVQYDNMGRVVKKELKVG
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Known secondary structure (DSSP)

TT
SS

SS
TTSSTT
TTS
S
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence PYANTTRYSYEYDADGQLQTVSINDKPLWRYSYDLNGNLHLLSPGNSARLTPLRYDIRDRITRLGDVQYK
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Known secondary structure (DSSP) SS



TTS
SS


SSS


TTS



TT

TT
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence MDEDGFLRQRGGDIFEYNSAGLLIKAYNRAGSWSVRYRYDGLGRRVSSKSSHSHHLQFFYADLTNPTKVT
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Known secondary structure (DSSP)
TTS
TT
TTS
TTSS

TTS

SSS



SSSTTS

 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence HLYNHSSSEITSLYYDLQGHLFAMELSSGDEFYIACDNIGTPLAVFSGTGLMIKQILYTAYGEIYMDTNP
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Known secondary structure (DSSP) TTTT
TTS
TTS


TTS



TTS

TTS
S
T
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence NFQIIIGYHGGLYDPLTKLVHMGRRDYDVLAGRWTSPDHELWKHLSSSNVMPFNLYMFKNNNPISNSQDI
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Known secondary structure (DSSP) TS

SB
GGG
TTTT
SSSTTTTSS

TTGGGS
BTTB




TT
SGGG
TTS



T
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence KCFMTDVNSWLLTFGFQLHNVIPGYPKPDMDAMEPSYELIHTQMKTQEWDNSKSILGVQCEVQKQLKAFV
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Known secondary structure (DSSP)
ST

GGGTSTTS





SS


TSSS

S


STS
 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence TLERFDQLYGSAPKTKKFASSGSVFGKGVKFALKDGRVTTDIISVANEDGRRVAAILNHAHYLENLHFTI
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Known secondary structure (DSSP)




GGGT









B


SS
TTSSSB
TTS
TT

TT

 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence DGVDTHYFVKPGPSEGDLAILGLSGGRRTLENGVNVTVSQINTVLNGRTRRYTDIQLQYGALCLNTRYGT
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Known secondary structure (DSSP) TT
S
SS

SS
TT




TT


TTS
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence TLDEEKARVLELARQRAVRQAWAREQQRLREGEEGLRAWTEGEKQQVLSTGRVQGYDGFFVISVEQYPEL
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Known secondary structure (DSSP)
TT


SS


S

TTSS
TTT
GGG
 .........1900....
Sequence SDSANNIHFMRQSE
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Known secondary structure (DSSP) TT
GGGS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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