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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7b8bA_

Fold library idPDB HeaderMoleculeTitle
c7b8bA_2.03PDB header: hydrolaseChain: A: PDB Molecule: polygalacturonase adpg2;


Added to library: Sat Jun 25 09:03:19 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LRTPTTVSVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTYLLKSIQLTGPCNSILTVQIF
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Known secondary structure (DSSP)



GGGGT



S

TT





S
 .........80.........90.........100.........110.........120.........130.........140
Sequence GTLSASQKRSDYKDISKWIMFDGVNNLSVDGGDTGVVDGNGETWWQNSCKRNKAKPCTKAPTALTFYNSK
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Known secondary structure (DSSP) S


GGG
SSTTS
SS

TTT


TTSTTT
TTS





S
 .........150.........160.........170.........180.........190.........200.........210
Sequence SLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIES
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Known secondary structure (DSSP) S
S
SS
SS
S


TTSTT

SS

SS
S
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence GSQNVQINDITCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQ
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Known secondary structure (DSSP) T

SSS
SGGG
S
S
STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence MDNVKNPIIIDQDYCDKSKCTTEKSAVQVKNVVYRDISGTSASENAITFNCSKNYPCQGIVLDRVNIKGG
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Known secondary structure (DSSP) SSS
SSSS



S


SSS

SSS
S
 .........360.........
Sequence KATCTNANVVDKGAVLPQC
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Known secondary structure (DSSP) SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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