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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7b75A_

Fold library idPDB HeaderMoleculeTitle
c7b75A_3.20PDB header: hormoneChain: A: PDB Molecule: thyroglobulin;


Added to library: Sat Jan 1 09:32:37 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PLRPCELQRETAFLKQADYVPQCAEDGSFQTVQCQNDGRSCWCVGANGSEVLGSRQPGRPVACLSFCQLQ
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Known secondary structure (DSSP)


TT
S



TTT
S

SS



TTSS


S

B

S



 .........80.........90.........100.........110.........120.........130.........140
Sequence KQQILLSYLPQCQDSGDYAPVQCDVQQVQCWCVDAEGMEVYGTRQLGRPKRCPRSCEIRNRRLLHGVGDK
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Known secondary structure (DSSP)





B
SSSSB
S

SSTT


SSS


GGG
S

SS


TTTT
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence SPPQCSAEGEFMPVQCKFVNTTDMMIFDLVHSYNRFPDAFVTFSSFQRRFPEVSGYCHCADSQGRELAET
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Known secondary structure (DSSP) S


B
SSS
B
S



STTSS
S


TTTS



S
S

B
SS

B
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GLELLLDEIYDTIFAGLDLPSTFTETTLYRILQRRFLAVQSVISGRFRCPTKCEVERFTATSFGHPYVPS
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Known secondary structure (DSSP) S

SSS




TTS


SSGGGSSTTSSS


T
S



 .........290.........300.........310.........320.........330.........340.........350
Sequence CRRNGDYQAVQCQTEGPCWCVDAQGKEMHGTRQQGEPPSCAEGQSCASERQQALSRLYFGTSATSCPPTI
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Known secondary structure (DSSP) B
SSSSB
S
SSS
B
TT

B
GGG

TTS




SS

STS




SS
TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence KELFVDSGLLRPMVEGQSQQFSVSENLLKEAIRAIFPSRGLARLALQFTTNPKRLQQNLFGGKFLVNVGQ
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Known secondary structure (DSSP)




TTTSTTT
SS
TT

S


TTSTTSST
 .........430.........440.........450.........460.........470.........480.........490
Sequence FNLSGALGTRGTFNPTVGSFGFEINLQENQNALKFLASLLELPEFLLFLQHAISVPEDVARDLGDVMETV
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Known secondary structure (DSSP) T
S


S
SS
S


B

TTS

B
T
SS
TTT
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence LSSQTCEQTPERLFVPSCTTEGSYEDVQCFSGECWCVNSWGKELPGSRVRGGQPRCPTDCEKQRARMQSL
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Known secondary structure (DSSP) GGG





TT



B
SS

B
STTB
SSS
B
TT

BSSS





 .........570.........580.........590.........600.........610.........620.........630
Sequence MGSQPAGSTLFVPACTSEGHFLPVQCFNSECYCVDAEGQAIPGTRSAIGKPKKCPTPCQLQSEQAFLRTV
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Known secondary structure (DSSP) TSS
SS






B
SSS
B
S

SS
B
STT
B
TT

TTS





 .........640.........650.........660.........670.........680.........690.........700
Sequence QALLSNSSMLPTLSDTYIPQCSTDGQWRQVQCNGPPEQVFELYQRWEAQNKGQDLTPAKLLVKIMSYREL
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Known secondary structure (DSSP) T
TT



TTTS





SSSSS

S

S

SSS

TT
S


 .........710.........720.........730.........740.........750.........760.........770
Sequence QDVPLAALEGKRPQPRENILLEPYLFWQILNGQLSQYPGSYSDFSTPLAHFDLRNCWCVDEAGQELEGMR
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Known secondary structure (DSSP)


SS

SS

S

S








SSS


SS

SSS




TT






SSS

B
TTS
B
SS

 .........780.........790.........800.........810.........820.........830.........840
Sequence SEPSKLPTCPGSCEEAKLRVLQFIRETEEIVSASNSSRFPLGESFLVAKGIRLRNEDLGLPPLFPPREAF
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Known secondary structure (DSSP)

TT


B


T
S
TTT



TGGGT

TTSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence AEQFLRGSDYAIRLAAQSTLSFYQRRRFSPDDSAGASALLRSGPYMPQCDAFGSWEPVQCHAGTGHCWCV
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Known secondary structure (DSSP) TTS
S
SS
TTS

TTSS








B
SSS
B
S
TTT
B
 .........920.........930.........940.........950.........960.........970.........980
Sequence DEKGGFIPGSLTARSLQIPQCPTTCEKSRTSGLLSSWKQARSQENPSPKDLFVPACLETGEYARLQASGA
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Known secondary structure (DSSP)
SSS


TT


BS
SS





T

BS
SSS

TTS


B
SSSSB
S
SS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence GTWCVDPASGEELRPGSSSSAQCPSLCNVLKSGVLSRRVSPGYVPACRAEDGGFSPVQCDQAQGSCWCVM
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Known secondary structure (DSSP)
B
SSS
SBS
SSS

SSS


TTS

BSS




TTTSS

TT
B
SS
S
B



 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence DSGEEVPGTRVTGGQPACESPRCPLPFNASEVVGGTILCQQCQLLCRQGSWSVFPPGQLPQPRACQRPQL
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Known secondary structure (DSSP) TTS


TT

BSSSS






SS
SSS

S
TT




TT
SSS





SS


 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence WQTIQTQGHFQLQLPPGKMCSADYADLLQTFQVFILDELTARGFCQIQVKTFGTLVSIPVCNNSSVVNVT
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Known secondary structure (DSSP)


S
SSGGGTTSS



S

TS
STT

SS



 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence WKSRLEDIPVASLPDLHDIERALVGKDLLGRFTDLIQSGSFQLHLDSQGDHFGTSPRTWFGCSEGFYQVL
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Known secondary structure (DSSP) TTTS
SSSS
SSTTTSS













S





SS

 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence TSEASQDGLGCVKCPEGSYSQDEECIPCPVGFYQEQAGSLACVPCPVGRTTISAGAFSQTHCVTDCQRNE
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Known secondary structure (DSSP)

TT
GGG



TTSSSS

TT

SSS
SS

SSS
S
SSS


SGGGS

S
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence AGLQCDQNGQYRASQKDRGSGKAFCVDGEGRRLPWWETEAPLEDSQCLMMQKFEKVPESKVIFDANAPVA
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Known secondary structure (DSSP) SS

B
TTSSB
SSSSSS


SSSS


SS







S


B

B
GGGB
SS
S



 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence VRSKVPDSEFPVMQCLTDCTEDEACSFFTVSTTEPEISCDFYAWTSDLRCQVKVRSHGQDSPAVYLKKGQ
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Known secondary structure (DSSP) SB




SSSTSS
TT



B


SSSS



B

SS





B


S

S



B

B
S
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence GSTTTLQKRFEPTGFQNMLSGLYNPIVFSASGANLTDAHLFCLLACDRDLCCDGFVLTQVQGGAIICGLL
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Known secondary structure (DSSP) SS
SS




S
BS


TTT

SSSSS


TTS
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence SSPSVLLCNVKDWMDPSEAWANATCPGVTNFQQVYLWKDSDMGSRPESMGCRKDTVPRPASPTEAGLTTE
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Known secondary structure (DSSP)
S
SSSS



SS

SS

S
S


TT

TTTS
SSSS
SS









TTT



 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence LFSPVDLNQVIVNGNQSLSSQKHWLFKHLFSAQQANLWCLSRCVQEHSFCQLAEITESASLYFTCTLYPE
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) S

TTS

TTT





SSS
SS
S
SS
S
SSSS


 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence AQVCDDIMESNAQGCRLILPQMPKALFRKKVILEDKVKNFYTRLPFQKLMGISIRNKVPMSEKSISNGFF
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Known secondary structure (DSSP)


TT

TT

S
SS

S




SS
SS


S

SS


SS
 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence ECERRCDADPCCTGFGFLNVSQLKGGEVTCLTLNSLGIQMCSEENGGAWRILDCGSPDIEVHTYPFGWYQ
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Known secondary structure (DSSP)
SS

S

SSS





SSSTTSS

S



TTT


STT
S
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence KPIAQNNAPSFCPLVVLPSLTEKVSLDSWQSLALSSVVVDPSIRHFDVAHVSTAATSNFSAVRDLCLSEC
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Known secondary structure (DSSP)



SS


TT
SS






SS


S
S
GGG
TT



SS


 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence SQHEACLITTLQTQPGAVRCMFYADTQSCTHSLQGQNCRLLLREEATHIYRKPGISLLSYEASVPSVPIS
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Known secondary structure (DSSP)
SS


SS




SS

SS

S




S
TTT
 .........1970.........1980.........1990.........2000.........2010.........2020.........2030
Sequence THGRLLGRSQAIQVGTSWKQVDQFLGVPYAAPPLAERRFQAPEPLNWTGSWDASKPRASCWQPGTRTSTS
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Known secondary structure (DSSP) TT
TT
TT
S


SSSSTTS








SS


B


SS



SS
 .........2040.........2050.........2060.........2070.........2080.........2090.........2100
Sequence PGVSEDCLYLNVFIPQNVAPNASVLVFFHNTMDREESEGWPAIDGSFLAAVGNLIVVTASYRVGVFGFLS
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Known secondary structure (DSSP) SSB
S



SS

TT



S

TTSSS
S

TTS



TTTT


 .........2110.........2120.........2130.........2140.........2150.........2160.........2170
Sequence SGSGEVSGNWGLLDQVAALTWVQTHIRGFGGDPRRVSLAADRGGADVASIHLLTARATNSQLFRRAVLMG
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Known secondary structure (DSSP)
SSSSS


SGGGTTTTTTTTTTS


STT


SS
 .........2180.........2190.........2200.........2210.........2220.........2230.........2240
Sequence GSALSPAAVISHERAQQQAIALAKEVSCPMSSSQEVVSCLRQKPANVLNDAQTKLLAVSGPFHYWGPVID
Predicted secondary structure






















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Known secondary structure (DSSP)

TTSTTSS

T


S
TTS
T

GGGS




T
 .........2250.........2260.........2270.........2280.........2290.........2300.........2310
Sequence GHFLREPPARALKRSLWVEVDLLIGSSQDDGLINRAKAVKQFEESRGRTSSKTAFYQALQNSLGGEDSDA
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Known secondary structure (DSSP) TTT

S
GGG



S


BTT

TTGGGT
TT

STTTT
 .........2320.........2330.........2340.........2350.........2360.........2370.........2380
Sequence RVEAAATWYYSLEHSTDDYASFSRALENATRDYFIICPIIDMASAWAKRARGNVFMYHAPENYGHGSLEL
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Known secondary structure (DSSP) S


S
TTSTS
SS
B



S
TTSSS
 .........2390.........2400.........2410.........2420.........2430.........2440.........2450
Sequence LADVQFALGLPFYPAYEGQFSLEEKSLSLKIMQYFSHFIRSGNPNYPYEFSRKVPTFATPWPDFVPRAGG
Predicted secondary structure







































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Known secondary structure (DSSP)
TTGGG
STTSSSS
TSSTT
SSTTT




SS







STT
 .........2460.........2470.........2480...
Sequence ENYKEFSELLPNRQGLKKADCSFWSKYISSLKT
Predicted secondary structure









SS confidence
































Known secondary structure (DSSP)


SSS

S
SST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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