PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c7b5sH_

Fold library id	PDB Header	Molecule	Title
c7b5sH_	3.60	PDB header: ligase	Chain: H: PDB Molecule: e3 ubiquitin-protein ligase arih1;

Links to external resources
Added to library: Sat Feb 13 08:34:12 2021

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D Y R Y E V L T A R L L K W C P A P D C H H V V K V Q Y P D A K P V R C K C G R Q F C F N C G E N W H D P V K C K W L K K W I K K C D R S R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S S
S
S S S
S S S
S S
S S S
T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A A L Q R Y L F Y C N R Y M N H M Q S L R F E H K L Y A Q V K Q K M E E M Q Q H N M S W I E V Q F L K K A V D V L C Q C R A T L M Y T Y V F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A F Y L K K N N Q S I I F E N N Q A D L E N A T E V L S G Y L E R D I S Q D S L Q D I K Q K V Q D K Y R Y C E S R R R V L L Q H V H E G Y E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S T
S S

. . . . . .

Sequence K D L W E Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	Y	R	Y	E	V	L	T	A	R	L	L	K	W	C	P	A	P	D	C	H	H	V	V	K	V	Q	Y	P	D	A	K	P	V	R	C	K	C	G	R	Q	F	C	F	N	C	G	E	N	W	H	D	P	V	K	C	K	W	L	K	K	W	I	K	K	C	D	R	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S	S								S	S			S						S	S	S					S	S	S		S	S			S	S	S											T					S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	A	L	Q	R	Y	L	F	Y	C	N	R	Y	M	N	H	M	Q	S	L	R	F	E	H	K	L	Y	A	Q	V	K	Q	K	M	E	E	M	Q	Q	H	N	M	S	W	I	E	V	Q	F	L	K	K	A	V	D	V	L	C	Q	C	R	A	T	L	M	Y	T	Y	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T																		T	T			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	F	Y	L	K	K	N	N	Q	S	I	I	F	E	N	N	Q	A	D	L	E	N	A	T	E	V	L	S	G	Y	L	E	R	D	I	S	Q	D	S	L	Q	D	I	K	Q	K	V	Q	D	K	Y	R	Y	C	E	S	R	R	R	V	L	L	Q	H	V	H	E	G	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S				S																												T		S	S
	.	.	.	.	.	.
Sequence	K	D	L	W	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T