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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7b52A_

Fold library idPDB HeaderMoleculeTitle
c7b52A_3.80PDB header: cell adhesionChain: A: PDB Molecule: erythrocyte membrane protein 1;


Added to library: Sat Apr 24 09:34:10 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TIANKIEEYLGAKSDDSKIDELLKADPSEVEYYRSGGDGDYLKNNICKITVNHSDSGKYDPCEKKLPPYD
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Known secondary structure (DSSP)

SSSS
TTTS
TS




S
STTTT

SS
TT


STTS
SSSSSS



S
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DNDQWKCQQNSSDGSGKPENICVPPRRERLCTYNLENLKFDKIRDNNAFLADVLLTARNEGEKIVQNHPD
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Known secondary structure (DSSP) SSS

TTSSSSSTTSSSS
SS


T
S
GGGTS



TTTTTS

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence TNSSNVCNALERSFADLADIIRGTDQWKGTNSNLEKNLKQMFAKIRENDKVLQDKYPKDQKYTKLREAWW
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Known secondary structure (DSSP) S
T


S
STT
TTGGG


TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NANRQKVWEVITCGARSNDLLIKRGWKCGHYEKEVPTKLDYVPQFLRWLTEWIEDFYREKQNLIDDMERH
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Known secondary structure (DSSP) TTTS
STT


SS


TTTT
SS



GGGS
TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence REECTREDHKSKEGTSYCSTCKDKCKKYCECVKKWKTEWENQENKYKDLYEQNKNKTSQKNTSRYDDYVK
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Known secondary structure (DSSP) TTTS
SSS



S
STTTTTGGGTT
S

SS




SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence DFFEKLEANYSSLENYIKGDPYFAEYATKLSFILNPSDGILQENCSDNKRGSSSNDSCDNKNQDECKKWI
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Known secondary structure (DSSP) TTT
SS

SS


SS


SSSS



















SS














 .........430.........440.........450.........460.........470.........480.........490
Sequence WKKSSGNEEGLQEEYANTIGLPPRTQSLYLGNLPKLENVCEDVKDINFDTKEKFLAGCLIVSFHEGKNLK
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Known secondary structure (DSSP)

SB
SSSS
GGGTTSS


TTTSS
SSSS
S
TT


SS

S

TTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence KRYPKENLCKALEYSFADYGDLIKGTSIWDNEYTKDLELNLQNNFGKLFGKYIKKNNTAEQDTSYSSLDE
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Known secondary structure (DSSP)



TTT

S
TTTTTTT
SS



SSS
TTTS

STT
 .........570.........580.........590.........600.........610.........620.........630
Sequence LRESWWNTNKKYIWTAMKHGAEMNITTCDDIPTIDLIPQYLRFLQEWVENFCEQRQAKVKDVITNCKECK
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Known secondary structure (DSSP) SSTTTT

SS





TTTTS
TT



 .........640.........650.........660.........670.........680.........690.........700
Sequence TKCKDECEKYKKFIEACGTAGGGIGTAGSPWSKRWDQIYKRYSKHIEDAKRNRKAGDENKCVQSDIDSFF
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Known secondary structure (DSSP) S


SS
SSS
SSS
SS
S
S




SS


SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence KHLIDIGLTTPSSYLSNVLDDNICGADKAPWTTYTTYTTTEKTLVVVNVPSPLGNTPYRYKYACQCKIPT
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Known secondary structure (DSSP) TTS


SS
SSSS
SS


S












SS
SSS
TTTTTTSS




 .........780.........790.........800.........810.........820.........830.........840
Sequence NEETCDDRKEYMNQWSCGDNYELCKYNGVDVKPTTVRSKLDGNDVTFFNLFEQWNKEIQYQIEQYMTNAC
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Known secondary structure (DSSP) TTTSS



B







B
SSS











T

 .........850.........860.........870.........880.........890.........900.........910
Sequence KEKCKCYKLWIEKINDQWGKQKDNYNKFRSKQIYVSLSNFLFFSCWEEYIQKYFNSKIKNIGSDTFEFLI
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Known secondary structure (DSSP) T


SST



S



SS
 .........920.........930.........940.........950.........960.........970.........980
Sequence KKCGNNSAHGEEIFSEKLKNAEKKCKSCDLNATNYIRGCQSKTYDGKIFPGKGGEKQWICKDTIIHGDTN
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Known secondary structure (DSSP) TTTTTT


T





S





SS

S

TTS

TT







B
SS
SSS


S
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence GACIPPRTQNLCVGELWDKSYGGRSNIKNDTKELLKEKIKNAIHKETELLYEYHDTGTAIISKNDKKGQK
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Known secondary structure (DSSP) SS
B
S


GGGSB
TTS
B


SS

TT
STTT

STTTS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence GKNDPNGLPKGFCHAVQRSFIDYKNMILGTSVNIYEHIGKLQEDIKKIIEKGTPENVNAWWKGIEREMWD
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Known secondary structure (DSSP) S


TTS

TTSSSS

TTTTTTT


 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence AVRCAITKINKKNNNSIFNGDECGVSPPTGNDEDQSVSWFKEWGEQFCIERLRYEQNIREACTICINSKS
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Known secondary structure (DSSP) SSS



S
SS
SS


SGGG
S


TT


 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence GDKIQGACKRKCEKYKKYISEKKQEWDKQKTKYENKYVGKSASDLLKENYPECISANFDFIFNDNIEYKT
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Known secondary structure (DSSP)




STTTS

TT
SS

TTTTT


S
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence YYPYGDYSSICSCEQVKYYKYNNAEKKNNKSLCYEKDNDMTWSKKYIKKLENGRSLEGVYVPPRRQQLCL
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Known secondary structure (DSSP) T
TTGGGGTTTS







SS
SS

TTTS





SS


B
TTB


SSS



S

B
T


 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence YELFPIIIKNEEGMEKAKEELLETLQIVAEREAYYLWKQYNPTGKGIDDANKKACCAIRGSFYDLEDIIK
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Known secondary structure (DSSP) TTTSSTTTTTS
S
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence GNDLVHDEYTKYIDSKLNEIFGSSNTNDIDTKRARTDWWENETDRKTIRQLVWDAMQSGVRYAVEEKNEN
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Known secondary structure (DSSP) T


B
SS
SS

TTTSBSSSSBT

 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence FPLCMGVEHIGIAKPQFIRWLEEWTNEFCEKYTKYFEDMKSKCIECKKACANYTNWLNPKRIEWNGMSNY
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Known secondary structure (DSSP)

SSS

S









T
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence YNKIYRKSNKESEDGKDYSMIMAPTVIDYLNKRCHGEINGNYICCSCKNIGALDLMNEVLNKMDKKYSAH
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Known secondary structure (DSSP) TT
BSSSSSSSSB

S


SSTT
SS


TTT






TT

TTT
S
 .........1620.........1630........
Sequence KMKCTEVYLEHVEEQLNEIDNAIKDYKL
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Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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