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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7atrA_

Fold library idPDB HeaderMoleculeTitle
c7atrA_1.55PDB header: peptide binding proteinChain: A: PDB Molecule: uncharacterized protein yeja;


Added to library: Sat Nov 20 09:22:47 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MQAIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGARTEQLYDTLF
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Known secondary structure (DSSP)


S
SSS

TT
SS
SS
TTS
TT




S


BS
TTSSSS
B
TTGGGSS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGT
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Known secondary structure (DSSP)
SSSSSSSTTSS
TT
B
TTS
B

S
TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TVKAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRVTSWKMGQNIVYSR
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Known secondary structure (DSSP) TT
SS

TTS



TTS
TTS

SS




SSTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VKDYWAANLPVNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDE
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Known secondary structure (DSSP)
TT
TTTTSGGGTT



SSSTTSSS



S
STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence QKNESAQDTRWLAFNIQRPVFSDRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAE
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Known secondary structure (DSSP)

S



TTSGGG
ST

TSTT




TTTTSTTS

S


 .........360.........370.........380.........390.........400.........410.........420
Sequence LVLLAPMKKDLPSEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLP
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Known secondary structure (DSSP) GGGGGGS
T








SSS

TTTTTTT

B
 .........430.........440.........450.........460.........470.........480.........490
Sequence ASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRSRDYDMMPRVWRAMPWPSSDLQISWSSEYINST
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Known secondary structure (DSSP) TTS

TTTT

T

S


SS

TTSGGGTTSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence YNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMAEDRLAWWDKFSQPAVRPI
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Known secondary structure (DSSP)

SS



TTT
TTS

SS


SS

S
 .........570.........580
Sequence YSLGIDTWWYDVNKAAKLPS
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Known secondary structure (DSSP) SS

GGG

TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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