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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7aslO_

Fold library idPDB HeaderMoleculeTitle
c7aslO_4.50PDB header: viral proteinChain: O: PDB Molecule: gag protein;


Added to library: Sat Jun 26 08:44:01 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEW
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Known secondary structure (DSSP)





SSS
TTS
S

T

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DRVHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSI
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Known secondary structure (DSSP) S





S
SSS
S


TTSS

TSSS







S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQG
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Known secondary structure (DSSP) TT



SS

TT

S
TS
TTS
TTS
TT
 .........220.........230.....
Sequence VGGPGHKARVLAEAMSQVINSATIM
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Known secondary structure (DSSP) TTSTTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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