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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7armC_

Fold library idPDB HeaderMoleculeTitle
c7armC_3.60PDB header: protein transportChain: C: PDB Molecule: lipoprotein-releasing abc transporter permease subunit


Added to library: Sat Apr 10 10:36:41 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSE
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Known secondary structure (DSSP)

S
TTSTTSS

SSTTSTTTTTSSSS

B
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence HGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGK
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Known secondary structure (DSSP) SS
B
TTTS
TTS


SS

SS

SSS

TTSTTBSS

GGG

TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRL
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Known secondary structure (DSSP)

BT

TT
SSS



SSS





B

SSSGGGTSS

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence MGNITGWRLWLDEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITS
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Known secondary structure (DSSP)


BSS
SS

STTTSS


TT

GGGTSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAA
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Known secondary structure (DSSP)
TTS

TTTSSSS
GGG


SS
S
 .........360.........370.........380.........390..
Sequence LPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALR
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Known secondary structure (DSSP)





TTS

STTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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