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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7agmB_

Fold library idPDB HeaderMoleculeTitle
c7agmB_1.35PDB header: sugar binding proteinChain: B: PDB Molecule: n-acetylmuramoyl-l-alanine amidase;


Added to library: Sat Nov 21 09:05:23 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SNIAGMIVFLDPGHNGANDASIGRQVPTGRGGTKNCQESGTATDDGYPEHSFTWDTTLRVRAALTALGVR
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Known secondary structure (DSSP)


TT

S
SS

GGGGS
SSSSS




B
TT

BTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TAMSRGNDNALGPCVDERAAMANSLRPHAIVSIHADGGPPTGRGFHVLYSSPPLNAAQSGPSVQFAKVMR
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Known secondary structure (DSSP) S
S
SSS





S


TT

SBSS
SST
 .........150.........160.........170.........180.........190.........200.........210
Sequence DQLAASGIPPATYIGQGGLNPRSDIAGLNLAQFPSVLVECGNMKNPVDSALMKSPEGRQKYADAIVRGIA
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Known secondary structure (DSSP) TT

B
SSSSBTTS

T
SS
TTSS
 ......
Sequence GFLGSQ
Predicted secondary structure

SS confidence





Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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