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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7aglA_

Fold library idPDB HeaderMoleculeTitle
c7aglA_1.60PDB header: sugar binding proteinChain: A: PDB Molecule: n-acetylmuramoyl-l-alanine amidase;


Added to library: Sat Nov 21 08:39:18 2020
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence IAGRIVVLDPGHNGANDSSINNQVPDGRGGTKSCQTSGTATDGGYPEHTFTWNTVLLIRQQLTQLGVRTA
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Known secondary structure (DSSP)
TT

S
SS

GGGGS
SSSSS




B
TTS
BTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence MTRGDDNKLGPCIDKRAEIENSYNPDAVVSIHADGGPAGGHGFHVNYSNPPVNAVQGEPTLRFAKTMRDS
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Known secondary structure (DSSP) S
S
SSS



T

S


TT


BSS
SSSTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LQAAGLTPATYIGTGGLYGRSDLAGLNLAQHPKVLVELGNMKNAQDSAMMTSPEGRSKYAQAVVQGIVAY
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Known secondary structure (DSSP) TT

B
SSSSBTTS

T
SS
TTSS
 ..
Sequence LS
Predicted secondary structure
SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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