PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c7aeaA_

Fold library id	PDB Header	Molecule	Title
c7aeaA_	3.40	PDB header: transcription	Chain: A: PDB Molecule: dna-directed rna polymerase iii subunit rpc1;

Links to external resources
Added to library: Sat Feb 6 09:31:23 2021

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K E Q F R E T D V A K K I S H I C F G M K S P E E M R Q Q A H I Q V V S K N L Y S Q D N Q H A P L L Y G V L D H R M G T S E K D R P C E T C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T
B
S S
S S T T
T T B T T
T T S
S S S S S
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G K N L A D C L G H Y G Y I D L E L P C F H V G Y F R A V I G I L Q M I C K T C C H I M L S Q E E K K Q F L D Y L K R P G L T Y L Q K R G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S S T T T B
S S S
B
T T
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K K K I S D K C R K K N I C H H C G A F N G T V K K C G L L K I I H E K Y K T N K K V V D P I V S N F L Q S F E T A I E H N K E V E P L L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
B
S S S
B
S T T
S S
S S
T T
T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence R A Q E N L N P L V V L N L F K R I P A E D V P L L L M N P E A G K P S D L I L T R L L V P P L C I R P S V V N E D D L T M K L T E I I F L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
B
T T
T T T S G G G T
T T T
G G G S
T T T S
S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence N D V I K K H R I S G A K T Q M I M E D W D F L Q L Q C A L Y I N S E L S G I P L N M A P K K W T R G F V Q R L K G K Q G R F R G N L S G K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S
T T S
S S
T T T T T S S T T S T T S S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence R V D F S G R T V I S P D P N L R I D E V A V P V H V A K I L T F P E K V N K A N I N F L R K L V Q N G P E V H P G A N F I Q Q R H T Q M K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S
T T B
B T T S
S S S T T T S S S
S S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence R F L K Y G N R E K M A Q E L K Y G D I V E R H L I D G D V V L F N R Q P S L H K L S I M A H L A R V K P H R T F R F N E C V C T P Y N A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
T T T
T T
T T
S S
S G G G
B S S S S
G G G T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence F D G D E M N L H L P Q T E E A K A E A L V L M G T K A N L V T P R N G E P L I A A I Q D F L T G A Y L L T L K D T F F D R A K A C Q I I A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S T T S B S T T
S B
T T T
B
S S B
T T T S S S S S
G

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence S I L V G K D E K I K V R L P P P T I L K P V T L W T G K Q I F S V I L R P S D D N P V R A N L R T K G K Q Y C G K G E D L C A N D S Y V T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G
S S S
S S S
S B
S S S
B
S T T
S S
S S
S S
T T

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence I Q N S E L M S G S M D K G T L G S G S K N N I F Y I L L R D W G Q N E A A D A M S R L A R L A P V Y L S N R G F S I G I G D V T P G Q G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
B S S S S S
S
G G G S
T T T

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence L K A K Y E L L N A G Y K K C D E Y I E A L N T G K L Q Q Q P G C T A E E T L E A L I L K E L S V I R D H A G S A C L R E L D K S N S P L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
T T S
T T T T T T
T T

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence M A L C G S K G S F I N I S Q M I A C V G Q Q A I S G S R V P D G F E N R S L P H F E K H S K L P A A K G F V A N S F Y S G L T P T E F F F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
T T
B
B T T B S
S S S S S S S T T S
T T
S G G G T B
S
S S S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence H T M A G R E G L V D T A V K T A E T G Y M Q R R L V K S L E D L C S Q Y D L T V R S S T G D I I Q F I Y G G D G L D P A A M E G K D E P L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T S
S S S
S S G G G T
B
G G G
S S S S S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence E F K R V L D N I K A V F P C P S E P A L S K N E L I L T T E S I M K K S E F L C C Q D S F L Q E I K K F I K G V S E K I K K T R D K Y G I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T S S G G G G S
S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence N D N G T T E P R V L Y Q L D R I T P T Q V E K F L E T C R D K Y M R A Q M E P G S A V G A L C A Q S I G E P G T Q M T L K T F H F A G V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S
G G G G G S S
T S B
T T
S T T T T

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence S M N I T L G V P R I K E I I N A S K A I S T P I I T A Q L D K D D D A D Y A R L V K G R I E K T L L G E I S E Y I E E V F L P D D C F I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T
S
S S
S S T T
S
G G G T
S S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence V K L S L E R I R L L R L E V N A E T V R Y S I C T S K L R V K P G D V A V H G E A V V C V T P R E N S K S S M Y Y V L Q F L K E D L P K V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T S S S T T
G G G
S S S
S S
T T T G G G

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence V V Q G I P E V S R A V I H I D E Q S G K E K Y K L L V E G D N L R A V M A T H G V K G T R T T S N N T Y E V E K T L G I E A A R T T I I N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
T T
S
T T S T T G G G
S
T

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence E I Q Y T M V N H G M S I D R R H V M L L S D L M T Y K G E V L G I T R F G L A K M K E S V L M L A S F E K T A D H L F D A A Y F G Q K D S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T S S S S
S S T T T
T T S
T T

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380 .

Sequence V C G V S E C I I M G I P M N I G T G L F K L L H K A D R D P N P P K R P L I F D T N E F H I P L V T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S T
S S G G G S S
S S
S S S
S T T
S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	E	Q	F	R	E	T	D	V	A	K	K	I	S	H	I	C	F	G	M	K	S	P	E	E	M	R	Q	Q	A	H	I	Q	V	V	S	K	N	L	Y	S	Q	D	N	Q	H	A	P	L	L	Y	G	V	L	D	H	R	M	G	T	S	E	K	D	R	P	C	E	T	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S																T	T	T											B			S	S		S	S	T	T					T	T	B	T	T		T	T	S			S	S	S	S	S			S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	K	N	L	A	D	C	L	G	H	Y	G	Y	I	D	L	E	L	P	C	F	H	V	G	Y	F	R	A	V	I	G	I	L	Q	M	I	C	K	T	C	C	H	I	M	L	S	Q	E	E	K	K	Q	F	L	D	Y	L	K	R	P	G	L	T	Y	L	Q	K	R	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T																	S	S	T									T	T	B		S	S	S			B														T	T		T	T			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	K	K	I	S	D	K	C	R	K	K	N	I	C	H	H	C	G	A	F	N	G	T	V	K	K	C	G	L	L	K	I	I	H	E	K	Y	K	T	N	K	K	V	V	D	P	I	V	S	N	F	L	Q	S	F	E	T	A	I	E	H	N	K	E	V	E	P	L	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T			B		S	S	S			B								S	T	T						S	S				S	S												T	T								T	T					T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	A	Q	E	N	L	N	P	L	V	V	L	N	L	F	K	R	I	P	A	E	D	V	P	L	L	L	M	N	P	E	A	G	K	P	S	D	L	I	L	T	R	L	L	V	P	P	L	C	I	R	P	S	V	V	N	E	D	D	L	T	M	K	L	T	E	I	I	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					B										T	T			T	T	T	S	G	G	G	T			T	T	T			G	G	G	S										T	T	T	S		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	D	V	I	K	K	H	R	I	S	G	A	K	T	Q	M	I	M	E	D	W	D	F	L	Q	L	Q	C	A	L	Y	I	N	S	E	L	S	G	I	P	L	N	M	A	P	K	K	W	T	R	G	F	V	Q	R	L	K	G	K	Q	G	R	F	R	G	N	L	S	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T																							S			S				T	T	S			S	S					T	T	T	T	T	S	S	T	T	S					T	T	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	V	D	F	S	G	R	T	V	I	S	P	D	P	N	L	R	I	D	E	V	A	V	P	V	H	V	A	K	I	L	T	F	P	E	K	V	N	K	A	N	I	N	F	L	R	K	L	V	Q	N	G	P	E	V	H	P	G	A	N	F	I	Q	Q	R	H	T	Q	M	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S										T	T	S		T	T			B		B					T	T	S								S	S	S											T	T	T	S	S	S								S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	F	L	K	Y	G	N	R	E	K	M	A	Q	E	L	K	Y	G	D	I	V	E	R	H	L	I	D	G	D	V	V	L	F	N	R	Q	P	S	L	H	K	L	S	I	M	A	H	L	A	R	V	K	P	H	R	T	F	R	F	N	E	C	V	C	T	P	Y	N	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S						T	T	T			T	T									T	T								S	S			S	G	G	G									B	S	S	S	S					G	G	G					T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	F	D	G	D	E	M	N	L	H	L	P	Q	T	E	E	A	K	A	E	A	L	V	L	M	G	T	K	A	N	L	V	T	P	R	N	G	E	P	L	I	A	A	I	Q	D	F	L	T	G	A	Y	L	L	T	L	K	D	T	F	F	D	R	A	K	A	C	Q	I	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S										S									T	T	S	B	S	T	T		S	B		T	T	T			B		S	S	B		T	T	T	S							S	S	S	S													G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	I	L	V	G	K	D	E	K	I	K	V	R	L	P	P	P	T	I	L	K	P	V	T	L	W	T	G	K	Q	I	F	S	V	I	L	R	P	S	D	D	N	P	V	R	A	N	L	R	T	K	G	K	Q	Y	C	G	K	G	E	D	L	C	A	N	D	S	Y	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G		S	S	S		S	S	S								S	B		S	S	S		B														S	T	T												S	S			S	S		S	S			T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	I	Q	N	S	E	L	M	S	G	S	M	D	K	G	T	L	G	S	G	S	K	N	N	I	F	Y	I	L	L	R	D	W	G	Q	N	E	A	A	D	A	M	S	R	L	A	R	L	A	P	V	Y	L	S	N	R	G	F	S	I	G	I	G	D	V	T	P	G	Q	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S													B	S	S	S	S	S										S																													G	G	G	S				T	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	K	A	K	Y	E	L	L	N	A	G	Y	K	K	C	D	E	Y	I	E	A	L	N	T	G	K	L	Q	Q	Q	P	G	C	T	A	E	E	T	L	E	A	L	I	L	K	E	L	S	V	I	R	D	H	A	G	S	A	C	L	R	E	L	D	K	S	N	S	P	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																						T	S						T	T	S																							T	T	T	T	T	T			T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	M	A	L	C	G	S	K	G	S	F	I	N	I	S	Q	M	I	A	C	V	G	Q	Q	A	I	S	G	S	R	V	P	D	G	F	E	N	R	S	L	P	H	F	E	K	H	S	K	L	P	A	A	K	G	F	V	A	N	S	F	Y	S	G	L	T	P	T	E	F	F	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		S	S										T	T				B			B	T	T	B	S				S	S	S	S	S	S	S	T	T	S		T	T				S	G	G	G	T	B			S		S	S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	H	T	M	A	G	R	E	G	L	V	D	T	A	V	K	T	A	E	T	G	Y	M	Q	R	R	L	V	K	S	L	E	D	L	C	S	Q	Y	D	L	T	V	R	S	S	T	G	D	I	I	Q	F	I	Y	G	G	D	G	L	D	P	A	A	M	E	G	K	D	E	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T																T	T					T	T	S					S	S	S					S	S	G	G	G	T		B		G	G	G			S	S	S	S	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	E	F	K	R	V	L	D	N	I	K	A	V	F	P	C	P	S	E	P	A	L	S	K	N	E	L	I	L	T	T	E	S	I	M	K	K	S	E	F	L	C	C	Q	D	S	F	L	Q	E	I	K	K	F	I	K	G	V	S	E	K	I	K	K	T	R	D	K	Y	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	S																T	T	S	S	G	G	G	G	S																										S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	N	D	N	G	T	T	E	P	R	V	L	Y	Q	L	D	R	I	T	P	T	Q	V	E	K	F	L	E	T	C	R	D	K	Y	M	R	A	Q	M	E	P	G	S	A	V	G	A	L	C	A	Q	S	I	G	E	P	G	T	Q	M	T	L	K	T	F	H	F	A	G	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S			S		G	G	G	G	G	S	S																				T	S	B			T	T																									S	T	T	T	T
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	S	M	N	I	T	L	G	V	P	R	I	K	E	I	I	N	A	S	K	A	I	S	T	P	I	I	T	A	Q	L	D	K	D	D	D	A	D	Y	A	R	L	V	K	G	R	I	E	K	T	L	L	G	E	I	S	E	Y	I	E	E	V	F	L	P	D	D	C	F	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S										T		S			S	S								S	S	T	T													S				G	G	G	T										S	S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	V	K	L	S	L	E	R	I	R	L	L	R	L	E	V	N	A	E	T	V	R	Y	S	I	C	T	S	K	L	R	V	K	P	G	D	V	A	V	H	G	E	A	V	V	C	V	T	P	R	E	N	S	K	S	S	M	Y	Y	V	L	Q	F	L	K	E	D	L	P	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T												T	T	S	S	S	T	T			G	G	G					S	S	S											S	S			T	T	T								G	G	G
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	V	V	Q	G	I	P	E	V	S	R	A	V	I	H	I	D	E	Q	S	G	K	E	K	Y	K	L	L	V	E	G	D	N	L	R	A	V	M	A	T	H	G	V	K	G	T	R	T	T	S	N	N	T	Y	E	V	E	K	T	L	G	I	E	A	A	R	T	T	I	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		T	T												T	T											S						T	T	S	T	T			G	G	G				S									T
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	E	I	Q	Y	T	M	V	N	H	G	M	S	I	D	R	R	H	V	M	L	L	S	D	L	M	T	Y	K	G	E	V	L	G	I	T	R	F	G	L	A	K	M	K	E	S	V	L	M	L	A	S	F	E	K	T	A	D	H	L	F	D	A	A	Y	F	G	Q	K	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T																T	S	S	S	S				S	S	T	T	T													T	T	S												T	T
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.
Sequence	V	C	G	V	S	E	C	I	I	M	G	I	P	M	N	I	G	T	G	L	F	K	L	L	H	K	A	D	R	D	P	N	P	P	K	R	P	L	I	F	D	T	N	E	F	H	I	P	L	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	S							T				S	S	G	G	G	S	S										S	S							S	S	S		S	T	T				S