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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7adkB_

Fold library idPDB HeaderMoleculeTitle
c7adkB_2.80PDB header: membrane proteinChain: B: PDB Molecule: lipoprotein;


Added to library: Sat Apr 10 08:33:18 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DFAYFGGTSGYDEYTKKDQKSRFDYDNERYMTRLKSQFGNSSNSINLKEYRGLETKQENIKKFDDQAAIS
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Known secondary structure (DSSP)

GGGTSS
TS



SS


SS
TTTSS


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence NFDTYYNAALKGFTLPVYGSDGKVSGLKIYEGAEIGKGPSVVDSLGRNEKAKTVGLARTLPNEEYKTSAI
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Known secondary structure (DSSP) S





TTS

B



S






TTS


SS
GGG
S


SB


TTTTTTTTTTTS


S

 .........150.........160.........170.........180.........190.........200.........210
Sequence QTFQTNFTIYKDYEKEIEEAEDNIKLFDSWNEQQIQSYISAQLTQLRLNYEDEVSQIDREISQTQPDKTT
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Known secondary structure (DSSP) TSS
TTTSS
TTT
SSS

GGGTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ILSNLNQKKSKIESEYQKELSTISKLNKDSLKEWQRKEIEKYNEKKKEKTFQISESGTMWIMDYLDENAG
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Known secondary structure (DSSP)

SS

S
S




SSS








TTS





SSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KNPTKFYFGTNSHVAKGIKDGMVSFSLTRLNSEVKVGQTFKLNGHDSNFTKFTFSPINGNKLEDAVTAIF
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Known secondary structure (DSSP) SS


TT

TT


TT

TT
B


TTT
TT
TT

GGGT
 .........360.........370.........380.........390.........400.........410.........420
Sequence HATDFINENSSPLKLLDSEQKSKYNGAGIFADFAIVEVDFAKLLDKGKYSYSVWSASNDITNQYETEQNK
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Known secondary structure (DSSP)

BSTT
STTS
SGGGBSSGGGTS
S

S
GGGTS
TTTTT
TTTS

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence LISKITNNYSESDKKVKFFSDSLLNEQTYAKFDRPLDFDPKKEDELKKYNDLDSLYIVGYPTAYKDFYLD
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Known secondary structure (DSSP) TTTTTT
S




S
TTSTTT


S


TTSSTTTTTTTS

BB




BBGGG
TTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence QYEDEKQLKNKKYDFSLWINSEYKFYNKLINKEGSTNSFKEYETGKGNFFSYQIGYRSFIDKPGLTDAFI
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Known secondary structure (DSSP) TT
T
STT
B



SS
GGGTTT



TT


SS
SS
B
B


SSS

STTSTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence TVNKVGKKLYSLKDKNKNEVKKYFNYGLEILPRFYAPAGGASGSSVRTKDNKLLAVYHASNETARTGLAV
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Known secondary structure (DSSP) S

SSS

STT


S
BTT



SB
TTTTTTTTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence AFRSDGYDYKNLFGDYKLGQYDLIYGGGKDQQKEKSYREVMNKMYSGKKSALFQNGFTDDKIPSEFKFNN
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Known secondary structure (DSSP) S

B
TTTTTT
B

TTT


TTS
SS
SSTT
SS
TT
SSGGGS
GGG

SS
 ....
Sequence GTQN
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Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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