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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7a4aA_

Fold library idPDB HeaderMoleculeTitle
c7a4aA_3.76PDB header: viral proteinChain: A: PDB Molecule: integrase catalytic domain-containing protein;


Added to library: Sat Sep 4 08:25:58 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence CSEVISVTSTEEVCTIQENKETCTFNHATTITLQPLQQQTCLTLNDPEKRPMGMLTVKPDGIKFRCNKKI
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Known secondary structure (DSSP)






TT




TT


SS
S







 .........80.........90.........100.........110.........120.........130.........140
Sequence EFFTRDHQIVSESVHRCHRAGSCHSDECHHVKDTDALPEFSSEANSRPGYTSCSSSCGCITCDGCFFCEP
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Known secondary structure (DSSP)



SSBTTBSTTTTTT

TT


SSS

GGGGSS

STTTTS
SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence SCLFHRLYAIPTTPTIYSIFYCPSWELEVDAEISLQREDETTTSTIRLLPGRTSTWNNIRFSLIGTIVPQ
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Known secondary structure (DSSP)
SS



S
SSS




SS

SSS




 .........220.........230.........240.........250.........260.........270.........280
Sequence LPILSSAFVTNGRQTSIVKPAYAGQLQSNSVGQLQCPNLEAAKQFECHFSRNLCTCTNALHKVSCTCYDG
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Known secondary structure (DSSP)
TTSSSTT



TTT

TTSS
SB
STT


SSSS

SSS



 .........290.........300.........310.........320.........330.........340.........350
Sequence SVEDHMEALPLPQTSKNFLVFEKDRNIYAKTHVGSALQLHIVAQDLKITTVKHTSHCQVEASDLSGCYSC
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Known secondary structure (DSSP)
TSBSS
SSSSS
SSS

TT












BSBSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TSGASLTLSCKSDNGEVLANMKCNEQTHVIRCTESGFINNILLMFDTSEVAADCTAACPGGIVNFTIKGL
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Known secondary structure (DSSP) SS
BB



SSS



SS


BSS






B


SS


SS


 .........430.........
Sequence LAFVNERIISQSYSATDVE
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Known secondary structure (DSSP)
B







S

B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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