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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6zy7A_

Fold library idPDB HeaderMoleculeTitle
c6zy7A_4.64PDB header: isomeraseChain: A: PDB Molecule: dna topoisomerase 2-alpha;


Added to library: Sat May 29 09:16:12 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDVGINYREVTFVPGLYKIFDEILVNAADNKQR
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Known secondary structure (DSSP)
S




GGGTT


S
TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAK
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Known secondary structure (DSSP)
TT

TTTT
S





TTTTSTTTTTTSSS

S


TTS


SS
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMELKPFNGEDYTCITFQPDLSKFKMQSLDKDIVAL
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Known secondary structure (DSSP) TTTTT
BTTTTB



B




S



TTTTT

S

 .........220.........230.........240.........250.........260.........270.........280
Sequence MVRRAYDIAGSTKDVKVFLNGNKLPVKGFRSYVDMYLKDKLDETGNSLKVIHEQVNHRWEVCLTMSEKGF
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Known secondary structure (DSSP) SSS
TT



TTTSS
B
SSS
B



TT



SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence QQISFVNSIATSKGGRHVDYVADQIVTKLVDVVKKKNVKAHQVKNHMWIFVNALIENPTFDSQTKENMTL
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Known secondary structure (DSSP)

SS


SS
BTT



GGG


SS

BSSTT


B

 .........360.........370.........380.........390.........400.........410.........420
Sequence QPKSFGSTCQLSEKFIKAAIGCGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDANDAGGRNST
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Known secondary structure (DSSP)
GGG
SS




TTTTSTSSSTT
S
TT
B

SSTTSTTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence ECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKNYE
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Known secondary structure (DSSP) S


STT
SSS



SS



TT


T

TT



 .........500.........510.........520.........530.........540.........550.........560
Sequence DEDSLKTLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPSLLRHRFLEEFITPIVKVSKNKQEMAFYSLP
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Known secondary structure (DSSP) SSS
S


SS
GGGGGSS



S

SSS



S
 .........570.........580.........590.........600.........610.........620.........630
Sequence EFEEWKSSTPNHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKE
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Known secondary structure (DSSP)
SSTTSS



SGGGS



B

STS
TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence WLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTC
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Known secondary structure (DSSP) T




SSSS

S

BTSS

TTT


 .........710.........720.........730.........740.........750.........760.........770
Sequence FKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRLHGGKDSASP
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Known secondary structure (DSSP) S


S
S


S
TT

STTT
SS
SB

BS



TTTTTTT


T
 .........780.........790.........800.........810.........820.........830.........840
Sequence RYIFTMLSSLARLLFPPKDDHTLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREIV
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Known secondary structure (DSSP) TT

B
TTS
GGGTTTS



GGGS



S



SS
T

SS




 .........850.........860.........870.........880.........890.........900.........910
Sequence NNIRRLMDGEEPLPMLPSYKNFKGTIEELAPNQYVISGEVAILNSTTIEISELPVRTWTQTYKEQVLEPM
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Known secondary structure (DSSP) T









SS

S
STT

SSS

SS

 .........920.........930.........940.........950.........960.........970.........980
Sequence LNGTEKTPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYD
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Known secondary structure (DSSP) S

SSS







SS





TT







SSS



 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence TVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIKVLIQRGYD
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Known secondary structure (DSSP)
TTT



TT

T

 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence SDPVKAWKEAQQKVSGPTFNYLLDMPLWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKEDLATFIE
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Known secondary structure (DSSP)

T





STTT
S
GGGGSS
TT
 .........1130.........1140.........1150.........
Sequence ELEAVEAKEKQDEQVGLPGKGGKAKGKKTQMAEVLPSPR
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Known secondary structure (DSSP)

SSS









S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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