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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6zwxA_

Fold library idPDB HeaderMoleculeTitle
c6zwxA_2.70PDB header: rna binding proteinChain: A: PDB Molecule: atp-dependent rna helicase hrpa;


Added to library: Sat Jul 3 09:11:11 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KLTFTALQQRLDSLXLRDRLRFSRRLHGVKKVKNPDAQQAIFQEXAKEIDQAAGKVLLREAARPEITYPD
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Known secondary structure (DSSP)


TS
TTT


T






T
 .........80.........90.........100.........110.........120.........130.........140
Sequence NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICXELGRGIKGLIGHTQPRRLAARTVANRIAEE
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Known secondary structure (DSSP) T
SS
S
SS
STTTTSSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LKTEPGGCIGYKVRFSDHVSDNTXVKLXTDGILLAEIQQDRLLXQYDTIIIDEAHERSLNIDFLLGYLKE
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Known secondary structure (DSSP) TT

TTSS
STT



TT
ST
TT
TT
SGGG

 .........220.........230.........240.........250.........260.........270.........280
Sequence LLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVTERDQLQAIFDAVDELSQESH
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Known secondary structure (DSSP) GGG
TT
SS
TSSS














S
TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence GDILIFXSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI
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Known secondary structure (DSSP)

S
TT
TT

SSS
TTS

SS
GGGGSS


TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILR
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Known secondary structure (DSSP)



TTTT



GGG
SSS
SS
S
SS


GGGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence TNLASVILQXTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIAYKLTPLGRQLSQLPVDPRLARXVL
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Known secondary structure (DSSP) S
T


TTTS

SS


TTT






TTSSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence EAQKHGCVREAXIITSALSIQDPRERPXDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAF
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Known secondary structure (DSSP) T
TS

SB


GGGTTS

SSBSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence RRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGXKDADKQEYTGA
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Known secondary structure (DSSP) TB
TT



SS


TT
GGG
TTSS
G
 .........640.........650.........660.........670.........680.........690.........700
Sequence RNARFSIFPGSGLFKKPPKWVXVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAVXATE
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Known secondary structure (DSSP) GG

TTSTTSSS

SSSS

TGGGTTT



 .........710.........720.........730......
Sequence KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVE
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Known secondary structure (DSSP) TT
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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