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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6zpnA_

Fold library idPDB HeaderMoleculeTitle
c6zpnA_3.50PDB header: protein bindingChain: A: PDB Molecule: wd_repeats_region domain-containing protein;


Added to library: Sat May 22 10:35:46 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ISQLANNWYMYFTDKRHETTGKPKEIQDWRMRDRLKTVSAAIAVCLNKLEAWQDPTIPPVSKALENIGKA
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Known secondary structure (DSSP)
TTTTTS



S
S
SS







S









BTTB



SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LQSQYETLAIRTRCKQYLDPSIEETKKFCISLRRNAKDERVLFHYNGHGVPKPTASGEIWVFNKNYTQYI
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Known secondary structure (DSSP)
TTSS
BTTTSSSS



SSS

TTS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence PVSLYDLQQWLQAPTIFVWDCSEAGNILKNYHKFVERHEKEEEEQSYEKVNFRPYIHLAACASKENLPTN
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Known secondary structure (DSSP)
S
SSSTTTT










SS
SS





 .........220.........230.........240.........250.........260.........270.........280
Sequence PMLPADLFTCCLTTPIEMALWFFVLQNPLKTKLTPERARKLGGRLQERRTPLGELNWIFTAITDTIAWTT
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Known secondary structure (DSSP) SSS
S
S
TTT



T
SS
TT
TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LPRDLFRKFFRQDLMVAALFRNFLLAQRIMPVYGCHPQSYPELPDTRRHPLWEAWDHAVDMALAQLPMLY
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Known secondary structure (DSSP) S
SS
GGGGS


SS




TT
TT




 .........360.........370.........380.........390.........400.........410.........420
Sequence DYVPSTFFTEQLTAFEIYLTRGDAAAQKPPEQLPVVLQVLLSQQHRLRALILLGRFLDLGPWAVQLALSI
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Known secondary structure (DSSP)




TSGGGTTT


SSTT
TTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence GIFPYVLKLLQSAAQELKPVMVFIWTRILAVDISCQQDLIKDNGYTYFSSIMRPNETIPVVGLSVIDEHK
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Known secondary structure (DSSP) T
GGG


TTTTT
TTTTSTT





SS




 .........500.........510.........520.........530.........540.........550.........560
Sequence AMCAFILSMLCKGFKTGQVVCNSTEIMTSCLYHTEHPDNPLLRQWSCLCISQLWKDFNEAKWRGIRENAL
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Known secondary structure (DSSP) SS
TTS
S
SSS
TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence QKLAALARDSCPEVRAAMIHAMTTFLGIPEVTDEVARLEEGIAWALLEMATDGSPIVRKELLVFWSVFVL
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Known secondary structure (DSSP) GGGG
S
TT
SS

GGGG
S
 .........640.........650.........660.........670.........680.........690.........700
Sequence RYENKFLVAAYEQLLEEKEYDSLYAAIWKHLCIMSVDPHPEVQRDATTIVDYIHHALLHSPVGTQAQTLM
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Known secondary structure (DSSP) T

TS
SSSSS
T
 .........710.........720.........730.........740.........750.........760.........770
Sequence DEILRAYHVAPEPLSPGYQERKPTLPLVSTFLEWSTEYFREPQMKTQPQKLYARTHRWNNQIGLINNGTQ
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Known secondary structure (DSSP)


S
S




TT







S



GGGGTS




S



SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence PSKMTFHQFENCVAVADDGNTITVWDWKTNARLSRFSNGNPEGTKISDLCFINEDDQALLMTGSSDGVIR
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Known secondary structure (DSSP)
SSSSSSS
TTTT







TT


TTTS
TTS
 .........850.........860.........870.........880.........890.........900.........910
Sequence IYNNYDSDERVELASAWRALTHGMVFEWLQVNGRVLVAGDERVIRIWSAGQEICTHEIPARSGSCVTSLT
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Known secondary structure (DSSP) S
TTSTTT


S



TTTT
SSSTTTT


SS
 .........920.........930.........940.........950.........960.........970.........980
Sequence SDQMTGNIFVAGFGDGAIRVFDSRLRPHEAMVRKWKDDARQWVRSVHMQRGGQRELLSASRNGKISLWDI
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Known secondary structure (DSSP)
TTT

TTSTTS
TTS

TT



TTT
S
SSS
S
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence RMDQPLKTFQSTKEILRTASTHEHLPVFAVGTSAHMVKVFDFDGNELTRLEPYSNFLQGSKASPIATTAF
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Known secondary structure (DSSP) SSSS

SS

SSSSTTTTTS




SS
TT
TTS
 .........1060.........1070.........
Sequence HPHRMILGCASRGDNYISLYSCSNERVPN
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Known secondary structure (DSSP)
SSSSSS



S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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