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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6zltB_

Fold library idPDB HeaderMoleculeTitle
c6zltB_3.90PDB header: membrane proteinChain: B: PDB Molecule: susc homolog;


Added to library: Sat Nov 14 11:55:30 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VVVTGYTTQRKADLTGAVSVVKVDEIQKQGENNPVKALQGRVPGMNITADGNPSGSATVRIRGIGTLNNN
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Known secondary structure (DSSP)
TT
GGG

S

TTT

S
TTTTTSSSSSS
S
TT

SS


SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence DPLYIIDGVPTKAGMHELNGNDIESIQVLKDAASASIYGSRAANGVIIITTKQGKKGQIKINFDASVSAS
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Known secondary structure (DSSP)

TTSS
SSSS
TT

S

STTTTTT
TT
TT





TT


 .........150.........160.........170.........180.........190.........200.........210
Sequence MYQSKMNVLNTEQYGRAMWQAYVNDGENPNGNALGYAYNWGYNADGNPVLYGMTLSKYLDSKNTMPVADT
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Known secondary structure (DSSP)





B

TS
TTS
SSS
TTS

SBSSTT

SB



 .........220.........230.........240.........250.........260.........270.........280
Sequence DWFDEITRTGVIQQYNLSVSNGSEKGSSFFSLGYYKNLGVIKDTDFDRFSARMNSDYKLIDDILTIGQHF
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Known secondary structure (DSSP)
STTTSB






SS


SBTT



SSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TLNRTSEVQAPGGIIETALDIPSAIPVYASDGSWGGPVGGWPDRRNPRAVLEYNKDNRYTYWRMFGDAYV
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Known secondary structure (DSSP)

B


TTSS
TTS
SS
SSSS




SSS




SSS
B





 .........360.........370.........380.........390.........400.........410.........420
Sequence NLTPFKGFNLRSTFGLDYANKQARYFTYPYQEGTQTNNGKSAVEAKQEHWTKWMWNAIATYQLEVGKHRG
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Known secondary structure (DSSP) B
SSSS








TT

S





TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence DVMIGMELNREDDSHFSGYKEDFSILTPDYMWPDAGSGTAQAYGAGEGYSLVSFFGKMNYSYADRYLLSL
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Known secondary structure (DSSP)



B

SS
STTT
STTS

S

B





B
TTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence TLRRDGSSRFGKNHRYATFPSVSLGWRITQENFMKELTWLDDLKLRASWGQTGNQEISNLARYTIYAPNY
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Known secondary structure (DSSP) SSS
TT


STTSGGGTT

S




TTTTS




 .........570.........580.........590.........600.........610.........620.........630
Sequence GTTDSFGGQSYGTAYDITGSNGGGVLPSGFKRNQIGNDNIKWETTTQTNVGIDFSLFKQSLYGSLEYYYK
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Known secondary structure (DSSP) S
S

TTS








SS



S










S



TTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence KATDILTEMAGVGVLGEGGSRWINSGAMKNQGFEFNLGYRNKTAFGLTYDLNGNISTYRNEILELPETVA
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Known secondary structure (DSSP)
B



GGG
S



BTTT



ST
 .........710.........720.........730.........740.........750.........760.........770
Sequence ANGKFGGNGVKSVVGHTYGAQVGYIADGIFKSQDEVDNHATQEGAAVGRIRYRDIDHNGVIDERDQNWIY
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Known secondary structure (DSSP) TSSSSSSSS

TTS
TT
B
B




STTS


SS
SSSS

B

SS
SS

SSS

 .........780.........790.........800.........810.........820.........830.........840
Sequence DPTPSFSYGLNIYLEYKNFDLTMFWQGVQGVDIISDVKKKSDFWSASNVGFLNKGTRLLNAWSPTNPNSD
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Known secondary structure (DSSP)



S


TT
SS


SS
SS
SSSSS


BTTGGG


SS



S
 .........850.........860.........870.........880.........890.........900.........910
Sequence IPALTRSDTNNEQRVSTYFVENGSFLKLRNIQLGYTVPAVISKKMRMDRLRFYCSAQNLLTIKSKNFTGE
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Known secondary structure (DSSP) S



SS

S


S
BGGG





B

TTT
SB
B

S


SS

SS
 .........920.........930...
Sequence DPENPNFSYPIPVNITFGLNIGF
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Known secondary structure (DSSP)
SS

SSS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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