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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6zfbH_

Fold library idPDB HeaderMoleculeTitle
c6zfbH_3.90PDB header: transcriptionChain: H: PDB Molecule: dna helicase;


Added to library: Sat Oct 17 09:22:01 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QDKEWKEEQSRIDEVLKELEKKERFLETSAGGLKHDIIGLRKSFWEDVKVNFDDAHEAIETMASIKQQAE
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Known secondary structure (DSSP)
TSTTT




SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLSDREHNHRRMDQQLKRIHQLKKSPYFGRIDFIENGEEQAERIYIGLASCLDEKEEHFLIYDWRAPISS
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Known secondary structure (DSSP) TSS




SSS
S
SS
B
STTTSS
SBTTSGGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence LYYNYSPGKAEYEVPGETIEGEMVLKRQFMIKNGTLKAMFNTDMTIGDEMLQEVLSHHSDTQMKNIVSTI
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Known secondary structure (DSSP) GGGTSSSS
SSSB





SSS





SSSS
STSSS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QKEQNQIIRNEKSKILIVQGAAGSGKTSAALQRVAYLLYRHRGVIDAGQIVLFSPNFLFNSYVSSVLPEL
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Known secondary structure (DSSP)

SSS


SSSTTTTS
SS


S


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GEENMEQATFQEYIEHRLGRKFKCESPFDQLEYCLTETKGGDFPTRLAGITWKAGLSFQQFINEYVTRLS
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Known secondary structure (DSSP)
SS


B

TTTS



TT


TTSST
 .........360.........370.........380.........390.........400.........410.........420
Sequence SEGMIFKNIIFRGQKLITKEQIQSYFYSLDQNHSIPNRMEQTAKWLLSELNKLEKKERRKDWVVHEAELL
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Known secondary structure (DSSP) TS






SSS
S
SSS
TT
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence DKEDYLDVYKKLQERKRFSESTFNDYQREQQLLAAIIVKKAFKPLKQAVRLLAFLDVTQLYLQLFSGWGG
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Known secondary structure (DSSP)
TTT


STT
S
TT
TT
S

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence KFQHEKMDAIGELTRSAFTDNKLLYEDAAPFLYMQDLIEGRKKNTKIKHLFIDEAQDYSPFQMAYMRSIF
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Known secondary structure (DSSP) S


SSSS



TT

SS



STTSS

 .........570.........580.........590.........600.........610.........620.........630
Sequence PAASMTVLGDINQSIYAHTINGDQRMDACFEDEPAEYVRLKRTYRSTRQIVEFTKAMLQDGADIEPFNRS
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Known secondary structure (DSSP) TT


S
STT

SS


SSTGGGGS








SS
SSS

S



S

 .........640.........650.........660.........670.........680.........690.........700
Sequence GEMPLVVKTEGHESLCQKLAQEIGRLKKKGHETIAVICKTAHQCIQAHAHMSEYTDVRLIHKENQPFQKG
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Known secondary structure (DSSP)



B



SST
S


SSTTT


B

SSS




SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence VCVIPVYLAKGIEFDAVLVYDASEEHYHTEHDRRLLYTACTRAMHMLAVFYTGEASPFVTAVPPHLYQIA
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Known secondary structure (DSSP) B




SS


SS
T

S



SSS
TTTT
SSS
STTT
 .
Sequence E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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