Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6zceq_

Fold library idPDB HeaderMoleculeTitle
c6zceq_5.30PDB header: ribosomeChain: Q: PDB Molecule: 40s ribosomal protein s15;


Added to library: Sat Oct 10 09:06:08 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KSAKEKLLDEMQDVYNKISQAENSWLTISNEFDLISRLLVRAQQQNWGTPNIFIKVVAQVEDAVNNKAVA
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP)

TT

TTTSS
S


 .........80.........90.........100.........110.........120.........130.........140
Sequence RAYNTTKQRVKKVSRENEDSMAQEDFFTRLQTIIDSRGKKTVNQQSLISTLEELLTVAEKPYEFIMAYLT
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) S

SS




ST
 .........150.........160.........170.........180.........190.........200.........210
Sequence LIPSRFDASANLSYQPIDQWKSSFNDISKLLSILDQTIDTYQVNEFADPIDFIEDEPKEDSDGVKRILGS
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) TSSSSSS

TTTTS
TTTT
S

SS
TTT


S

SSTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IFSFVERLDDEFMKSLLNIDPHSSDYLIRLRDEQSIYNLILRTQLYFEATLKDEHDLERALTRPFVKRLD
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) S
TTS

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence HIYYKSENLIKIMETAAWNIIPAQFKSKFTSKDQLDSADYVDNLIDGLSTILSKQNNIAVQKRAILYNIY
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TTTTS


S



SS
SSS

S
STTTTSS
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence YTALNKDFQTAKDMLLTSQVQTNINQFDSSLQILFNRVVVQLGLSAFKLCLIEECHQILNDLLSSSHLRE
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) TT
ST
SSTTT
TTTTTTSS
STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence ILGQQSLHRISLNSSNNASADERARQCLPYHQHINLDLIDVVFLTCSLLIEIPRMTAFYSGIKVKRIPYS
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) TTT


SGGGTTT

SSSSTTTTTSSS

GGG


S

SS




 .........500.........510.........520.........530.........540.........550.........560
Sequence PKSIRRSLEHYDKLSFQGPPETLRDYVLFAAKSMQKGNWRDSVKYLREIKSWALLPNMETVLNSLTERVQ
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) SS
SS


S

ST

STTGGGSSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence VESLKTYFFSFKRFYSSFSVAKLAELFDLPENKVVEVLQSVIAELEIPAKLNDEKTIFVVEKGDEITKLE
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) SSSS




TTS




B

SSS


B

S
SS
 ......
Sequence EAMVKL
Predicted secondary structure

SS confidence





Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D