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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6zcep_

Fold library idPDB HeaderMoleculeTitle
c6zcep_5.30PDB header: ribosomeChain: P: PDB Molecule: 40s ribosomal protein s14-a;


Added to library: Sat Oct 10 09:14:21 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EFNFDQYIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKII
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Known secondary structure (DSSP)






S



BGGGTTTS




TTTT
S
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KSFHGKRLDLKHRLFLYTMKDVERYNSPSSSLKSWLMDDKVRDQFVLQDDVKTSVFWNSMFNEEDSLVES
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Known secondary structure (DSSP) TTSSSS

TS


S
STT
TT


SS

SS

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RENWSTNYVRFSPKGTYLFSYHQQGVTAWGGPNFDRLRRFYHPDVRNSSVSPNEKYLVTFSTEPIIVEED
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Known secondary structure (DSSP) TSSSS

TTSS

SSTTTT
TT
TTSSSS




SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence NEFSPFTKKNEGHQLCIWDIASGLLMATFPVIKSPYLKWPLVRWSYNDKYCARMVGDSLIVHDATKNFMP
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Known secondary structure (DSSP)
SS



TTSTT

TTT






SS

S
SS
TTSS
TTGGGTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LEAKALKPSGIRDFSFAPEGVKLQPFRNGDEPSVLLAYWTPETNNSACTATIAEVPRGRVLKTVNLVQVS
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Known secondary structure (DSSP)


GGGS

S
S
SS
B

SS

SSS

B



SSS
TTT

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence NVTLHWQNQAEFLCFNVERHTKSGKTQFSNLQICRLTERDIPVEKVELKDSVFEFGWEPHGNRFVTISVH
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Known secondary structure (DSSP)
TTSS
TTSSSSSSTT

SS
SSSS

 .........430.........440.........450.........460.........470.........480.........490
Sequence EVADMNYAIPANTIRFYAPETKEKTDVIKRWSLVKEIPKTFANTVSWSPAGRFVVVGALVGPNMRRSDLQ
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Known secondary structure (DSSP)

SS

SSS

B
TTTSS







TTSS

SSS
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence FYDMDYPGEKNINDNNDVSASLKDVAHPTYSAATNITWDPSGRYVTAWSSSLKHKVEHGYKIFNIAGNLV
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Known secondary structure (DSSP) TB


SS


S
SSBS
B









TTSS
TTTSSS

TT

 .........570.........580.........590.........600.........610.........620.........630
Sequence KEDIIAGFKNFAWRPRPSILSNAERKKVRKNLREWSAQFEEQDAMEADTDLILHQRELLKQWTEYREKIG
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Known secondary structure (DSSP)
TT







TSSSSS


SSTT

 .........640......
Sequence QEMEKSMNFKIFDVQP
Predicted secondary structure



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Known secondary structure (DSSP)




SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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