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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6zblB_

Fold library idPDB HeaderMoleculeTitle
c6zblB_3.60PDB header: membrane proteinChain: B: PDB Molecule: merozoite surface protein-1;


Added to library: Sat May 22 09:10:45 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GVAVSSGPAVVEESHDPLTVLSISNDLKGIVSLLNLGNKTKVPNPLTISTTEMEKFYENILKNNDTYFND
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Known secondary structure (DSSP)

SSSSS





S

TTGGGS

TTTTTS
S




SSS


SGGGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DIKQFVKSNSKVITGLTETQKNALNDEIKKLKDTLQLSFDLYNKYKLKLDRLFNKKKELGQDKMQIKKLT
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Known secondary structure (DSSP) T

 .........150.........160.........170.........180.........190.........200.........210
Sequence LLKEQLESKLNSLNNPHNVLQNFSVFFNKKKEAEIAETENTLENTKILLKHYKGLVKYYNGESSPLKTLS
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Known secondary structure (DSSP) TS




TTTTT



GGG
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence EVSIQTEDNYANLEKFRVLSKIDGKLNDNLHLGKKKLSFLSSGLHHLITELKEVIKNKNYTGNSPSENNK
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Known secondary structure (DSSP) TSTT




 .........290.........300.........310.........320.........330.........340.........350
Sequence KVNEALKSYENFLPEALSGFENEYDVIYLKPLAGVYRSLKKQIEKNIFTFNLNLNDILNSRLKKRKYFLD
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Known secondary structure (DSSP) TGGGS






S
TTTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence VLESDLMQFKHISSNEYIIEDSFKLLNSEQKNTLLKSYKYIKESVENDIKFAQEGISYYEKVLAKYKDDL
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Known secondary structure (DSSP) GGGGGGGB
SSSSSBS
SS
GGGS
 .........430.........440.........450.........460.........470.........480.........490
Sequence ESIKKVIKEEKEKFPESKFLPFLTNIETLYNNLVNKIDDYLINLKAKINDCNVEKDEAHVKITKLSDLKA
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Known secondary structure (DSSP)



SS
 ........
Sequence IDDKIDLF
Predicted secondary structure


SS confidence







Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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