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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6zbhC_

Fold library idPDB HeaderMoleculeTitle
c6zbhC_3.60PDB header: membrane proteinChain: C: PDB Molecule: merozoite surface protein-1;


Added to library: Sat May 22 08:43:12 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VAVSSPLTVLSISNDLKGIVSLLNLGNKTKVPNPLTISTTEMEKFYENILKNNDTYFNDDIKQFVKSNSK
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Known secondary structure (DSSP)






GGGS

GGGGGGS

S




SSS

SSSTTST
 .........80.........90.........100.........110.........120.........130.........140
Sequence VITGLTETQKNALNDEIKKLKDTLQLSFDLYNKYKLKLDRLFNKKKELGQDKMQIKKLTLLKEQLESKLN
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Known secondary structure (DSSP) S

 .........150.........160.........170.........180.........190.........200.........210
Sequence SLNNPHNVLQNFSVFFNKKKEAEIAETENTLENTKILLKHYKGLVKYYNGESSPLKTLSEVSIQTEDNYA
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Known secondary structure (DSSP) S




GGGTT



TTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence NLEKFRVLSKIDGKLNDNLHLGKKKLSFLSSGLHHLITELKEVIKNKNYTGNSPSENNKKVNEALKSYEN
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Known secondary structure (DSSP) TSS





TGG
 ....
Sequence FLPE
Predicted secondary structure

SS confidence



Known secondary structure (DSSP) GS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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