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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6za2A_

Fold library idPDB HeaderMoleculeTitle
c6za2A_3.35PDB header: hydrolaseChain: A: PDB Molecule: por secretion system protein poru;


Added to library: Sat Oct 2 09:47:43 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QRAMGKTADRSLMASGHWVKIRVDASGVYRLTDEQLRANGFSDPSKVGVFGYGGGVLPEDLSRITTDDLP
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Known secondary structure (DSSP)

S




SS
GGGSS
SS
TT
SSGGG



SS


SSGGG



SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PVPVLRQGNALYFYAVGPVTWFYNPAKTTMEHTVNTYSTHGYYFLSDAAGAPLQMSQYTGGGASAEALID
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Known secondary structure (DSSP)
B
SS

STTTT
SS
SSSTTSS

B

B




SS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence YYDELMLHEQELYSPKESGRDLYGESFSAVNTRTVKFPLRGNTRSSGELGTVFSYIAKARSAGGGREMSL
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Known secondary structure (DSSP)


B

TTT
S

B

B
SS
S

TTB
SS
SSSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence SANGILIFSDPFSMTSNEVSNSYLAGKKRRLYRSTPMNSLVNELRLDANYSMTGDAVNLDFIEVATQNDL
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Known secondary structure (DSSP) TT



STT

S


SS
TTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RYDGAPMHIRRFSNLPVLGGESCRFVISEVPESLVVLQANSSLTASLVPVKTVGDKTIEFVAPPKGQDRR
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Known secondary structure (DSSP) B

SS


TT
SS
TT
BS

SS
SSSTT



TT
SB
TTSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TINTFYAVDLSQASAPEILGAVPNQNLHGEEIPDLIIVSTQALLPEADRLATYRREKNGLKVLVVLQEQV
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Known secondary structure (DSSP)
B
TTT







GGG



S
TTTTS


 .........430.........440.........450.........460.........470.........480.........490
Sequence FNEFSGGTPDATAYRLFAKMFYDRWKANAPVGETFPMQMLLFGDGAHDNRKVSVAWQKPYLQQTEFLLTF
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Known secondary structure (DSSP) TTS



TT




S
BBSSTT

SGGG
S


B

 .........500.........510.........520.........530.........540.........550.........560
Sequence QAVNSTNVNSYVTDDYFGLLDDQPASVNIGWRNYNMAVGRFPVRTPAEARIAVDKTIRYEEDRESGAWRI
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Known secondary structure (DSSP)
GGGS
SGGGG

S


TTS
GGGS


S


S
 .........570.........580.........590.........600.........610.........620.........630
Sequence RACFAMPVRAFQDKKKMLETLQSGIILLNYAGHGGPAGWSDEHLLTLNDIHNFNYKHMPIWITATCEEVF
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Known secondary structure (DSSP)








S





SSS

BTT
S

S





 .........640.........650.........660.........670.........680.........690.........700
Sequence LHEKSGTPIMFSTTRVVYNTQNEKINGFMLRRMFEKAKDGRYRTMGEIIRSAKQGMLSTVFPDSINQLSF
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Known secondary structure (DSSP)
S

S
SS

B
SSS
B

TTTT


TTSS


T
SSSTT




 .........710.........720.........730.........740.........750.........760.........770
Sequence FLMGDPSVRMNLPTHKVQLTAINGQDPEGQYGTIMLKSLERVALKGKVTDEKGTFDETFSGKVFLTVFDG
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Known secondary structure (DSSP) S
TT





STTB

TT
SS
TT
TT

B
TT

SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence RKKMTALEEEGNDLSLVYYDYPNVMYAGIAEVKDGLFETSFIVPKDVNYSEHEGRINLYAYNESTKAEAM
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Known secondary structure (DSSP)




SSS






BTT

S





S

TTTT
 .........850.........860.........870.........880.........890.........900.........910
Sequence GVDFSIRVQPGIPDEVTEDNTPPEIISCFLNDSTFRSGDEVNPTPLFMAEVFDLNGINITGSGVGHDITL
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Known secondary structure (DSSP)




STTGGG

S

SSSS

TT

SS

TT
B

S

SSS
S
 .........920.........930.........940.........950.........960.........970.........980
Sequence CIDGRADLTYNLNAYFTSSATDAGVGTILFMIPALAEGDHTARLTVWDIFNNAVHHDFSFRVVDGIAPDV
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Known secondary structure (DSSP) TT
GGG
GGG
SSSTT




SBTTS

TT
S


 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence ADVILFPNPVRESATFRIFHNRPGSDLNVVVEIYDFTGRLVNSLPVKTYSSSYGEPIEIKWDLTSKYGVK
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Known secondary structure (DSSP) SSSBSS
SS
SS
TTS

GGGSS



B
TTS
B
 .........1060.........1070.........1080.
Sequence IGNGFYLYRCVVNSPGGQTASMAKKMIVVAQ
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Known secondary structure (DSSP)

STT






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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