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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6z8hA_

Fold library idPDB HeaderMoleculeTitle
c6z8hA_1.38PDB header: membrane proteinChain: A: PDB Molecule: variant surface glycoprotein mitat 1.13;


Added to library: Sat Mar 20 08:32:47 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NAPCTTACGCKSRLLKRLDLYTSKYADGINNERENSEAYSKLVTAALAAVPTMQRKILPLLGAAADILDI
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Known secondary structure (DSSP)




SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence CRRELATARPLVQAAISKIEEAAGVYNTLHKLERGLGEAKIEFGGTDLRLTKTKFRATSLGTIHTADCPN
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Known secondary structure (DSSP) TT



TTT
S


GGG
TT







S
 .........150.........160.........170.........180.........190.........200.........210
Sequence ADEVKIGLEHEENEPEPAKLITHGHLDATCASGVGQSSSCTAVEANTHLTLGLTFSGSSKDESATWNAAT
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Known secondary structure (DSSP)






GGGGGG









STTS
S





TT
SS



TT
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence NNKRAIHSNDADFLGSNATVAHEALKAIRSAGASTPCSSLITDFNAVRANPKFKLMVIKALLNKPTAEKE
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Known secondary structure (DSSP) TS


SSTTTT
SSTT


TT
T
SS
TT

SG
 .........290.........300.........310.........320.........330.........340.........350
Sequence SDAPADEVNNAINSAYGREGSEYNTKTWKDIGSTRIPKADPPGEKTDTIDKLSSLPQWGDAIARLLLQEI
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Known secondary structure (DSSP) GGS
SGGGTTTTTTT


TTS
TTTS
S
 .
Sequence T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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