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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6z34A_

Fold library idPDB HeaderMoleculeTitle
c6z34A_2.27PDB header: membrane proteinChain: A: PDB Molecule: cymd;


Added to library: Sat Nov 7 08:36:47 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AFNLVGVGPVSQGMGGIGAAFNIGAQGMMLNPATLTQMQEGMHLGLGMDIITAELEVRNNGPYVAPELSL
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Known secondary structure (DSSP)


SS
STTT

SSS

GGGGGGS
GGGGGGS
S



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VWRGERYALGVGAFASDGVGTLENYSRLIVLRIPFSAAYQVNEKLSVGASLDAVWTSVNLGLLLDTTQIG
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Known secondary structure (DSSP) TT




SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TLVGQGQVSGSLMPALLSVPELSAGYLSADNHRASGGGVDSWGIGGRLGLTYQLTPKTRVGIVYNFKTHV
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Known secondary structure (DSSP) TT
STTSTT
TTTSTTB
SSS

BB
 .........220.........230.........240.........250.........260.........270.........280
Sequence GDLSGNADLTAVSAVAGNIPLSGELKLHNFEMPASLVAGISHEFSDQFAVAFDYKRVYWSDVMDDIEVNF
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TTT





B

TT
GGGS



 .........290.........300.........310.........320.........330.........340.........350
Sequence KQKATGDTINLKLPFNYRDTNVYSLGAQYRYGANWVFRAGVHYAQLANPPSTPTTSLSGGFSYAFSPEDV
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Known secondary structure (DSSP) TTT








TTT






TT
 .........360.........370.........380..
Sequence VDFSLAYGFKKEVSHSQIVTSISYTKSFHHHH
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Known secondary structure (DSSP)






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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