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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6z16a_

Fold library idPDB HeaderMoleculeTitle
c6z16a_2.98PDB header: membrane proteinChain: A: PDB Molecule: multisubunit na+/h+ antiporter, a subunit;


Added to library: Sat Aug 15 09:12:40 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PTLHIAMFAPFLLALLVPFFYKCIRSLHVGWFVFPLPIALFVYFLSYIDDVRNDEVIRATMPWIPSLRIS
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Known secondary structure (DSSP)

SS

SS
TTTTTT

TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FDAYVDGLSLLFALLITGIGSLVVLYSIYYLQKGKEPLGNFYVYLLLFMGAMLGVVLSDHLIALYMFWEL
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Known secondary structure (DSSP)
S
SSSS
B
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence TSISSFLLIAYWFKRDRSRYGAQKSMLITMFGGLLMLGGFVALAIAGGTYNIRELVHTPLTEHPLFIPAL
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Known secondary structure (DSSP) TSSTTSSS
SBTTS

SSSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VLILFGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYVIARLTPIFAVSSVWVWTVALVGLV
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Known secondary structure (DSSP) TT
TTGGGSTTTGGGS
TTTTSTTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TLCWASFLASKQTDLKAILAYSTVSQLGLITSLLGIGGLSFHYDGMGENVFMVAVLAAIFHLFNHATFKG
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Known secondary structure (DSSP) TTS
SBTTT

GGG


T
 .........360.........370.........380.........390.........400.........410.........420
Sequence SLFMVVGIVDHETGTRDIRRLGGLMTIMPITFTIALIGSLSMAGLPPFNGFLSKEMFFTAMLRAKDVAGW
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Known secondary structure (DSSP) S

BTTT



TTT
T
SSSTTTTTS
SG
 .........430.........440.........450.........460.........470.........480.........490
Sequence AVILPVVAWVASIFTFLYSALLVSRTFFGTYKPHVLKKEAHEAPFGMLIAPIVLASLVVFIGFVPNVLSD
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Known secondary structure (DSSP) GGTTTSS


TTT


S






 .........500.........510.........520.........530.........540.........550.........560
Sequence SVLAPAVYAVLYGLFAPNEALDVHISHWHGFTPELFMTIGVLLFGLVLYRTFPKWKKIYYRLSERMSLNF
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Known secondary structure (DSSP) TTTT

S

S


S

TTTTTTSS
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence FYDQSFVWMERGARSFISRVMNGSMRTYLMYIFTSLVALLLFTIGWHEQWHIDLSRLAHVRVYEVVLAIG
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Known secondary structure (DSSP)



S





TTS




 .........640.........650.........660.........670.........680.........690.........700
Sequence ILAATVTTVIAKSRLTAIVSLGAVGYAVALFFVLFRAPDLALTQLVIETISVALFLLCFYHLPKFTQKQE
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Known secondary structure (DSSP) S
SSTT
TTS
STT
TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence SVRFHLGNALVSLAVGMTMSIIAFLAYAGKHFDSISQYYVDNTYEKAAGKNMVNVILVDFRGFDTLFEIC
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Known secondary structure (DSSP)




TS




S
STTTTSS
S
STTS
 .........780........
Sequence VLAIAALGIYAMVKLRLA
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Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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