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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6yysH_

Fold library idPDB HeaderMoleculeTitle
c6yysH_3.08PDB header: transcriptionChain: H: PDB Molecule: rna polymerase-associated transcription factor held;


Added to library: Sat Nov 7 08:49:45 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSGRDYEDELQSERDYVAGLYARLDAERAQSQRRYAAALREHGGTAVERDAEVRALAKDIARLNVADNGL
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Known secondary structure (DSSP)


T
SS
TSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence CFGRLDTLDDARLYIGRLGIFDRDNDFEPLLLDWRAPMARPFYVATAANPENMRRRRQFHTLGRKVVDFT
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Known secondary structure (DSSP) TT


TTTTTTTSGGG
TTTS

SSS
SSSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence DEILGRDIVATIQAEQDQVIRLDHTGVLVIEGGPGTGKTVVALHRVAYLLYTYRKQMERHGVLVVGPTPA
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Known secondary structure (DSSP)
S



T



S

B



SSS
STTTSSSS
SS
GG
 .........220.........230.........240.........250.........260.........270.........280
Sequence FLDHIGRVLPSLGESDAVFMTPGDFVPGLHVTAEDTPEAAEVKGSLKILDVLKAAVADRQELPSEPIPID
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Known secondary structure (DSSP) GTTT
TTT


TTT
STT



S


STTSTTTS


SS




 .........290.........300.........310.........320.........330.........340.........350
Sequence LSDVTMRIDAETAKWARDEARKTGLPHNEARAEFVDVVTYVVTERAVARIGRGWLTRDDKHAWEKMRADV
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Known secondary structure (DSSP)
SSS



STTT


SSSS

STTTTT
TTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence VGELEDHEQFNAALDALWPILTPEDVLAQLYTSHERLRAAGAPECLWRADGEAWTVSDVPLLDELVDLLG
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Known secondary structure (DSSP) TTTTTS
TTTS



TTS
STT

STT

S
SSS

STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence RNKAADEAAERERREEEAYAAGVLDLMVDREDLMDDEDHLLAQDLIDAEELADRFKEQDNRELSERAAAD
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Known secondary structure (DSSP)

S

TTS

TTS

SSS



STTT

TTSS





T
 .........500.........510.........520.........530.........540.........550.........560
Sequence REWTYGHVVVDEAQELSEMDWRLLMRRCPRRSFTIVGDLAQRRSPAGARSWGAMLDSYVPGRWVYKSLSV
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Known secondary structure (DSSP) SS


SSSGGG


TT

B
B


STT

SSSS
S
TTTSTTT







 .........570.........580.........590.........600.........610.........620.........630
Sequence NYRTPAEIMAVAAAVLAEFAPDATPPDSVRACGVAPWARQVTDDDIASAIAEFVSEEAGREGTSVVIGPP
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Known secondary structure (DSSP) B
SS
SSSSS






B



S



SSSTTTTT





S
 .........640.........650.........660.........670.........680.........690
Sequence DVPGTVPPSETKGLEFDAVLVVEPERILADGPRGAAELYVALTRATQRLGVLYRDALPQA
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Known secondary structure (DSSP) SSTT


TTSS
S


STTT
SS

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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