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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ywfA_

Fold library idPDB HeaderMoleculeTitle
c6ywfA_1.90PDB header: lyaseChain: A: PDB Molecule: alginate lyase (pl7);


Added to library: Sat May 15 08:29:35 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YTAPSTESKFTEVLSKAKLQYPTSTTVAFADDLLDGYAASYFYLTSDLYMQFQVAGSSQRSELREMETSG
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Known secondary structure (DSSP)


GGGSGGGT
SSSS
TT

BTT
TTS
STT
B
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DEAAWDCTGSTAHVASAQIAIPVQEDGIEEVTILQVHDSDVTPVLRISWVSSITIDGVTSEDVVLATIRN
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Known secondary structure (DSSP)
B

TT
SS




TT

SSS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GIDDSTATKTVLQAHTTSRTEFNINVQNSKLSITVDGTTELDEADISQFDGSTCYFKAGAYNNNPTDTSA
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Known secondary structure (DSSP) TT

SS
TTTT
GGGTT

S
SSTTS
 .........220.....
Sequence NARIKMYELEWVDHH
Predicted secondary structure

SS confidence














Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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