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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6yufD_

Fold library idPDB HeaderMoleculeTitle
c6yufD_3.94PDB header: dna binding proteinChain: D: PDB Molecule: sister chromatid cohesion protein mis4;


Added to library: Sat Aug 22 08:32:45 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PSKIQRLQDVLLKQLQDTRLLISQVIEAENSEDFSSNSLFIKREDDDGKHISSHAIEKLYMALTKLSRLG
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Known secondary structure (DSSP)


SS


SS


SS
SSTT

T
 .........80.........90.........100.........110.........120.........130.........140
Sequence ACDKLLEEGSIILVKQILEKELKEFPNLDFILKTTALVLFIIFLVPSFKKLQNEESILHLLNILHSIFEY
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Known secondary structure (DSSP)
GGG


TTTTT

TT

SS
TT

SST
 .........150.........160.........170.........180.........190.........200.........210
Sequence TVPEAIDNIVQSKTSDARTSEIQHLSVLLQKVANVLNILSKVAHEIPLSEAVVIRIVYLFPKVSTLDNSF
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Known secondary structure (DSSP) TSS

SSGGGTSS


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence KTKLPNCNSSSFDFLKAPLFQTLQYLFRLYPYQRDFIIEESLTNFSHLPTARSVSRTYRLSNGKSIQYYS
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Known secondary structure (DSSP)
TT



GGGTTGGGS


S

SB
TTS
B

GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence TLFVRLIQSCSIQNLFDSEIVQSESKSTEALHSGNLTEHLKTVESILSKSRHEEYRIANHIVAYLLSRSL
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Known secondary structure (DSSP) TT




SSSSS
S

S
TTT


SS
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence KQNKTESDNSFAILTKILLEDLLNMLSLPEWCGTETIIRQFAMNLVMTVTNDKQAVSSKNAALDLISLIV
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Known secondary structure (DSSP) S

SSSTTTTTSS
TT

SSS
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence NKVLALFDLSLFEKHNIPAPTNFNDIISFIPSITRLNELSQVSFNHFYFLCKGDISLENILPYNYNKWFS
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Known secondary structure (DSSP)




TTTSS
SSS




S
SSS


TT
TTTTTSTTSS
STTTTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence FLLQLRKVCNDSEALKIIDNCIDKNMQKSQEGFNDEDIFIISLYHSSLFLNLKFFVSLIIGFLDSPQASL
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Known secondary structure (DSSP) SS

TTTTTGGGGS



GGGGSTTTSS
SSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence RTKCLRIINQMKTIPSILRTHPEVLAQIISKSNDQSAIVRDTVLDLLGTYIMAYRETIPQIYGCIISGIS
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Known secondary structure (DSSP) TTSSS
GGGTTT
GGG
S
SGGGTTTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence DPSTIVRKRAIKQLCEVYEATEDLNIRVDIASKLLTRSNDEEETISELSLEVLEKLWFSPASNELDCQKG
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Known secondary structure (DSSP)
S



TTSS
SSTTS


SSS
SS


 .........710.........720.........730.........740.........750.........760.........770
Sequence YEQLTFLEKQKLRVQYFPILKLCAEPSTERHVLLVTSLKTMLTSKEEINLSTLHTQIRLLLSCLFNQLIE
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Known secondary structure (DSSP)
SS
TT
TTTTSTTTT


TTS


SS
ST
 .........780.........790.........800.........810.........820.........830.........840
Sequence VVTETKGILYEIMSTLFVFSRAFPFLFDLSYLHLLKPYLRSASTIEEQRFLYYVVAIFRQVLPFQKEISE
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Known secondary structure (DSSP) TTT


SS
S


TTT


SSGGGGGGTTTS



T
 .........850.........860.........870.........880.........890.........900.........910
Sequence SFLRSLESVLLQRLTKAGTATLMEIVPCLCSLFTRLNDYERLKKIVVSCLKSLEEARHSENNFQKMVRLI
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Known secondary structure (DSSP) TTTT
SS

S
TTSS


TTTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence DLIGLFSRYGDLNRINDDWKHSLDFISPECDDAYVILLGYFQKLLKDAKGQLRIHIIDNMSRICLRETSL
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Known secondary structure (DSSP) TS

SS

TTTTTS
SSSS
TTTTS

SSTTG
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence FISPLMLSTLDMIIAENNVNEVSVLFKSFLELLAADEDLIFEADQKLSLKGKQNVKQWIEGVSASLMQHF
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Known secondary structure (DSSP) GG
T

TTTTTTTTT




GGGSTTTT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence LPCILDSCFSKNLRYSMLGIEILKCIIHQGLVNPRMCFSTIIALESNAIKETREVAILLHTELHRRHESL
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Known secondary structure (DSSP) TT
S
T
S
GGGTGGGTSSS
GGGTSSS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence IDGLYAQSADLIFSLQKTEEYQTFKLGEFSPFQSAYTIVSADKSSKSRKKLIMQILKPLKLDGIDLPSFT
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Known secondary structure (DSSP) SSSTS

SSS



TTS

TTTTTSS

TTSTTTS


TTTT


 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence EEKVSFVSFCCVCLAGIPYVSIEEPLMIISTVDSVLATIGPTITGWMKKLDHERFKILAGINLCNLIYLK
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Known secondary structure (DSSP) S


S
SSTTTTTTTT


STT
 .........1270..
Sequence RYIKYAFSISDS
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Known secondary structure (DSSP) S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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