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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ysqB_

Fold library idPDB HeaderMoleculeTitle
c6ysqB_3.30PDB header: immune systemChain: B: PDB Molecule: complement c4-b,complement c4-b;


Added to library: Sat Jun 27 08:54:58 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KPRLLLFSPSVVHLGVPLSVGVQLQDVPRGQVVKGSVFLRNPSRNNVPCSPKVDFTLSSERDFALLSLQV
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Known secondary structure (DSSP)

STTS
S

TT

TTSTTSS


SSS


 .........80.........90.........100.........110.........120.........130.........140
Sequence PLKDAKSCGLHQLLRGPEVQLVAHSPWLKDSLSRTTNIQGINLLFSSRRGHLFLQTDQPIYNPGQRVRYR
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Known secondary structure (DSSP)
TSTT

SS

TTTTTTS

S
S


SS
S
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VFALDQKMRPSTDTITVMVENSHGLRVRKKEVYMPSSIFQDDFVIPDISEPGTWKISARFSDGLESNSST
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Known secondary structure (DSSP)
TTSSB




SSS


SSS

TT

SSS
TT


 .........220.........230.........240.........250.........260.........270.........280
Sequence QFEVKKYVLPNFEVKITPGKPYILTVPGHLDEMQLDIQARYIYGKPVQGVAYVRFGLLDEDGKKTFFRGL
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Known secondary structure (DSSP)





SSSS
B
SS
B

TTS
B


SS


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ESQTKLVNGQSHISLSKAEFQDALEKLNMGITDLQGLRLYVAAAIIESPGGEMEEAELTSWYFVSSPFSL
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Known secondary structure (DSSP)

BTT
TT

GGG
SS
TTT






BS
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence DLSKTKRHLVPGAPFLLQALVREMSGSPASGIPVKVSATVSSPGSVPEVQDIQQNTDGSGQVSIPIIIPQ
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Known secondary structure (DSSP)
TTS

S

TTS
TTS
B

S


SSS



STT


S
 .........430.........440.........450.........460.........470.........480.........490
Sequence TISELQLSVSAGSPHPAIARLTVAAPPSGGPGFLSIERPDSRPPRVGDTLNLNLRAVGSGATFSHYYYMI
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Known secondary structure (DSSP) S


SSS



TT
S

S

S


TT
SS




 .........500.........510.........520.........530.........540.........550.........560
Sequence LSRGQIVFMNREPKRTLTSVSVFVDHHLAPSFYFVAFYYHGDHPVANSLRVDVQAGACEGKLELSVDGAK
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Known secondary structure (DSSP) TT

SS

GGG
STT





SS

SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence QYRNGESVKLHLETDSLALVALGALDTALYAAGSKSHKPLNMGKVFEAMNSYDLGCGPGGGDSALQVFQA
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Known secondary structure (DSSP)
B
TT
TT
SS





STTS



SS


SSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence AGLAFSDGDQWTLSRKRLSCPALEILQEEDLIDEDDIPVRSFFPENWLWRVETVDRFQILTLWLPDSLTT
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Known secondary structure (DSSP) T
SS
B




TT








SS
B

STTS




S




S

S
 .........710.........720.........730.........740.........750.........760.........770
Sequence WEIHGLSLSKTKGLCVATPVQLRVFREFHLHLRLPMSVRRFEQLELRPVLYNYLDKNLTVSVHVSPVEGL
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Known secondary structure (DSSP) TTT


B

S


S
TT



SSS



TT
 .........780.........790.........800.........810.........820.........830.........840
Sequence CLAGGGGLAQQVLVPAGSARPVAFSVVPTAAAAVSLKVVARGSFEFPVGDAVSKVLQIEKEGAIHREELV
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Known secondary structure (DSSP)
GGGS



TT




SSBSSS


SS
 .........850.........860.........870.........880.........890.........900.........910
Sequence YELNPLDHRGRTLEIPGNSDPNMIPDGDFNSYVRVTASDPLDTLGSEGALSPGGVASLLRLPRGCGEETM
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Known secondary structure (DSSP)
TTTTSSS




TT

TT






STT





TTTTGGG




SS
 .........920.........930.........940.........950.........960.........970.........980
Sequence IYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKGYMRIQQFRKADGSYAAWLSRDSSTWLTAFVLKV
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Known secondary structure (DSSP) TT
SSSS
TTTS

TTS


SSSSS


 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence LSLAQEQVGGSPEKLQETSNWLLSQQQADGSFQDPCPVLDRSMQGGLVGNDETVALTAFVTIALHHGLAV
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Known secondary structure (DSSP) TTTTS


TTTTB
SSS
B

SS

S
TTSSGGG
SS
GGGT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence FQDEGAEPLKQRVEASISKANSFLGEKASAGLLGAHAAAITAYALSLTKAPVDLLGVAHNNLMAMAQETG
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Known secondary structure (DSSP)

SSSSTT



TT

S



T
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence DNLYWMPQAPALWIETTAYALLHLLLHEGKAEMADQASAWLTRQGSFQGGFRSTQDTVIALDALSAYWIA
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Known secondary structure (DSSP) T








SSS
TTTTSTT


SS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence SHTTEERGLNVTLSSTGRNGFKSHALQLNNRQIRGLEEELQFSLGSKINVKVGGNSKGTLKVLRTYNVLD
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Known secondary structure (DSSP) TS




TTSSS
S





SSS

SSS


 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence MKNTTCQDLQIEVTVKGHVEYTMEANQESRVHYTVCIWRNGKVGLSGMAIADVTLLSGFHALRADLEKLT
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Known secondary structure (DSSP)




SSSB

S


B
S






B
TTSS

S


TT
GGGT
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence SLSDRYVSHFETEGPHVLLYFDSVPTSRECVGFEAVQEVPVGLVQPASATLYDYYNPERRCSVFYGAPSK
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Known secondary structure (DSSP) SSSS
S
SSS


SS
SS
B
S


SS
TTS

SSS
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence SRLLATLCSAEVCQCAEGKCPRQRRALERGYRMKFACYYPRVEYGFQVKVLREDSRAAFRLFETKITQVL
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Known secondary structure (DSSP)
SS

TT

SS



B
SS



TSS





TT
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence HFTKDVKAAANQMRNFLVRASCRLRLEPGKEYLIMGLDGATYDLEGHPQYLLDSNSWIEEMPSERLCRST
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Known secondary structure (DSSP)
SS
TT

SS
TTS




TTS


S
B
SSSSB


TT



TSS
 .........1550.........1560...
Sequence RQRAACAQLNDFLNEFGTQGCQV
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Known secondary structure (DSSP) TTT
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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