PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6ys8B_

Fold library id	PDB Header	Molecule	Title
c6ys8B_	3.90	PDB header: motor protein	Chain: B: PDB Molecule: gldm;

Links to external resources
Added to library: Sat Oct 17 08:59:15 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T P R Q K M I N L M Y L V F I A M L A M N V S K E V I S A F G L M N E K F E A A N T S S V T T N E S L L T S L D Q K A A E A K G E F A K A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
G G G S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E T A H K V Q A A S K E F Y D Y I G T L K T Q A V K G F E V D K E T G K M P Y E A M D R G D N I D D W F T G D G Y T K K G N E I I A K I E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T S
S
T T T
T T
G G G T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y K S D I K A A L G T D K K Y A G I I S E V E K K F D V S D V K N K E G I K E K Y L A Y H F K G F P A I A S A A K L S A W Q N D V K K T E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
T T T T
S
S S S
T T T

. . . . . . . . .

Sequence D V Y N S A L G K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	P	R	Q	K	M	I	N	L	M	Y	L	V	F	I	A	M	L	A	M	N	V	S	K	E	V	I	S	A	F	G	L	M	N	E	K	F	E	A	A	N	T	S	S	V	T	T	N	E	S	L	L	T	S	L	D	Q	K	A	A	E	A	K	G	E	F	A	K	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							S	S		G	G	G																																		S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	T	A	H	K	V	Q	A	A	S	K	E	F	Y	D	Y	I	G	T	L	K	T	Q	A	V	K	G	F	E	V	D	K	E	T	G	K	M	P	Y	E	A	M	D	R	G	D	N	I	D	D	W	F	T	G	D	G	Y	T	K	K	G	N	E	I	I	A	K	I	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T	T	T					T	T	S		S			T	T	T					T	T		G	G	G			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	K	S	D	I	K	A	A	L	G	T	D	K	K	Y	A	G	I	I	S	E	V	E	K	K	F	D	V	S	D	V	K	N	K	E	G	I	K	E	K	Y	L	A	Y	H	F	K	G	F	P	A	I	A	S	A	A	K	L	S	A	W	Q	N	D	V	K	K	T	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S		S		T	T	T											T			S					S	S	S										T	T	T
	.	.	.	.	.	.	.	.	.
Sequence	D	V	Y	N	S	A	L	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)