Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ymdB_

Fold library idPDB HeaderMoleculeTitle
c6ymdB_1.25PDB header: transferaseChain: B: PDB Molecule: serine hydroxymethyltransferase;


Added to library: Sat Jun 6 08:31:17 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QTNLDFLLQTDPTISGMMQKELQRQREHLELIASENFTSPAVMATQGSVLTNKYAEGLPKKRYYGGCEFI
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)


S

TT




TSGGGG



TTSSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence DEIEQVAIDRAKELFGAASANVQPHSGAQANFAVFLTLLKPGDKIMGMDLSHGGHLTHGSPANVSGKWFE
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) T
S


SS

TT

GGGT

GGGT
TTSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AVHYGVSQETEQLDYDHILEVARQERPKLIICGYSAYPRIINFEKFRAIADEVGAYLLADIAHIAGLVAS
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)


TTTSS



S

SS

S


T

GGGT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GHHPNPVPHCDVVTTTTHKTLRGPRGGLILTRDPELGKKFNKSVFPGTQGGPLEHVIAGKAVAFGEALKP
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) TSS


TTTSSSSSTT


S
S
TTTT
SS

TS
 .........290.........300.........310.........320.........330.........340.........350
Sequence EFKAYSGQVIANAQAMAQQLQNRGFKIVSGGTDNHLMLVDLRSVNLTGKQADQLVSDVNITANKNTVPFD
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TT
GGGS
SSSGGGGT

TTT


TT
 .........360.........370.........380.........390.........400.........410.........
Sequence PESPFVTSGLRLGSPAMTTRGLGTEDFAEIANIIADRLQNPEDEQVKQACVQRVAALCERFPLYPHLNA
Predicted secondary structure



























SS confidence




































































Known secondary structure (DSSP) SS
TTT
SSTT


TT
S
SSTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D