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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6yagB_

Fold library idPDB HeaderMoleculeTitle
c6yagB_2.55PDB header: transport proteinChain: B: PDB Molecule: lipoprotein;


Added to library: Sat Feb 13 08:30:09 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SHHHHHHMSGENLYFQGASAAIVTDTGGVDDKSFNQSAWEGLQAWGKEHNLSKDNGFTYFQSTSEADYAN
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Known secondary structure (DSSP)









S









TT
TTSSSTT
TB

SSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NLQQAAGSYNLIFGVGFALNNAVKDAAKEHTDLNYVLIDDVIKDQKNVASVTFADNESGYLAGVAAAKTT
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Known secondary structure (DSSP) TT
SSGGG
TTSSB


S
TT
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KTKQVGFVGGIESEVISRFEAGFKAGVASVDPSIKVQVDYAGSFGDAAKGKTIAAAQYAAGADIVYQVAG
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Known secondary structure (DSSP) SSSSS
STT
TTS
S
SS
TT
SSG
 .........220.........230.........240.........250.........260.........270.........280
Sequence GTGAGVFAEAKSLNESRPENEKVWVIGVDRDQEAEGKYTSKDGKESNFVLVSTLKQVGTTVKDISNKAER
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Known secondary structure (DSSP) GGTS
GGG


SS

GGGG
TTS


T
 .........290.........300.........310.........320.........
Sequence GEFPGGQVIVYSLKDKGVDLAVTNLSEEGKKAVEDAKAKILDGSVKVPE
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Known secondary structure (DSSP) T


TT

TTTTS
SS

TSS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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