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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6y86A_

Fold library idPDB HeaderMoleculeTitle
c6y86A_3.40PDB header: membrane proteinChain: A: PDB Molecule: membrane protein insertase yidc;


Added to library: Sat Sep 25 08:42:40 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MVLRKVVAILLAILPIFLFAVEPIKVVRSEKEIVVLTRFEEYHFDLEKGILKDFYTLVDGRKHVFTYGND
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Known secondary structure (DSSP)
TTTTSST




TT
SSTTTT
TTS





S
 .........80.........90.........100.........110.........120.........130.........140
Sequence GFDVLDEGTPLTVIEEPIVTGVGKVSEGFSDEVSIVYNYGYVKKIFTIKNNENYTFFVDIENSKPVDVTV
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Known secondary structure (DSSP) SS
TT


SS

TT
SS

SSSS
SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence PRVSVDTSTDRYLENYFASFNPKTRTLVLLKHDEGLLFEGTLKVNGQKRFIVFMGPNKRTLIKKAFPEDY
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SSTTS

SSTTTT
SS
S


SS
S

S
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DVLIKALVNIPGFNKWYDSVFYGLVWFFWWLKDLTKNFGWAIMLFTLIVRLILYPLYHAQTKSLINMRKL
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Known secondary structure (DSSP) TSTTTS
TTSST
TS
 .........290.........300.........310.........320.........330.........340.........350
Sequence QPQIEAIKKKYKDPTKQQEALLKLYREAGVNPASGCLMLLIQLPIFMLLWSVIRYYVEEFAYSGSFLIWK
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Known secondary structure (DSSP) ST
SS
S

SSS


STTSS

SSTTSS

SSS
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence DLSAGGFSNNWLFLVITIVASYYTTLLTSQDARTAWQGIIMSVIFPFLFVGLPSGLFLYYATNTLIQLAV
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Known secondary structure (DSSP)
TT

SS
SSTTTTTTS
 .....
Sequence TYYTY
Predicted secondary structure
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Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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