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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6y83A_

Fold library idPDB HeaderMoleculeTitle
c6y83A_3.65PDB header: virus like particleChain: A: PDB Molecule: capsid protein;


Added to library: Sat Nov 14 08:45:27 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KPMFCEIIKLANRKRLIFNTTDERVYDARLNYCSTADSTVQADCHIYWRLKLRRTDAVFEEYTGQGYSLD
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SSGGG






SSS

SS
TTSS
TTSSS





SB


 .........80.........90.........100.........110.........120.........130.........140
Sequence TAAYPQQYTDIIRGYYSKHVSSSLAANTQHFVNVLAMLRHAGACIAHYCMTGKIDFDILSKKKHKNKEVV
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Known secondary structure (DSSP)




TTS
S

TT




B
SS

STS
SSS


 .........150.........160.........170.........180.........190.........200.........210
Sequence TLSNADSLSFLPHSALYLPSPLRASDPEIFNMLYLLGCACDASIAMDNISAKYSMPHYNPLQLSHALHVT
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Known secondary structure (DSSP)
STTGGGTT
SS




TT

S











 .........220.........230.........240.........250.........260.........270.........280
Sequence IFYMLSLMDSCGYGDDAVLALTSGLHSVTTVIAHSDEGGITRDALRELSYTQPYGTMPVPIAGYFQHINV
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Known secondary structure (DSSP) TT
TTT

SSSS



B


B




TTSS


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LFTTQPAWDQFAGIWDYVILATAALVHLSDPGMTVNDVTYPTTLTTKVATVDGRNSDLAAQMMHSATRFC
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Known secondary structure (DSSP)


SS

S

TT


SS

BTTB
 .........360.........370.........380.........390.........400.........410.........420
Sequence DIFVENLSTFWGVVANPDGNASQALLHAFNIVACAVEPNRHLEMNVMAPWYWVESSALFCDYAPFRSPIS
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Known secondary structure (DSSP) SSS


SS
SSS
SS

TTTSSS
TT
SS

SSS
S

TTS

 .........430.........440.........450.........460.........470.........480.........490
Sequence SAGYGPQCVYGARLVLAATNSLEFTGEAGDYSAYRFEWTTMRHNPLFNILNKRVGDGLANVDFRLRPFNE
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Known secondary structure (DSSP) TT
S
SS
TTS

SS
S

SS




GGG
TS
SSSSSSS
B

SSS


 .........500.........510.........520.........530.........540.........550.........560
Sequence WLLEGQPSRRSDTLDEYIWGSTSCDLFHPAELTSYTAVCVRFRNYLSGADGDVRILNTPTREVIEGNVVT
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Known secondary structure (DSSP)
BSBS
TTT


BTTTSS



SBSS

TTTTB
SS



SSS

S


SS
 .........570.........580.........590......
Sequence RCDGIRCLDSNKRIQHVPEVARRYCMMARYLAQART
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Known secondary structure (DSSP)






B
S

TS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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