Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6y5nB_

Fold library idPDB HeaderMoleculeTitle
c6y5nB_1.88PDB header: ligaseChain: B: PDB Molecule: e3 ubiquitin-protein ligase dtx1;


Added to library: Sat Oct 3 10:01:48 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KSKNPEDVVRRYMQKVKNPPDEDCTICMERLVTASGYEGVLRKGVRPELVGRLGRCGHMYHLLCLVAMYS
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)




SS

S
B
TTT
SBTTS




STT


S
TT
TTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence NGNKDGSLQCPTCKAIYGEKTGTQPPGKMEFHLIPHSLPGFPDTQTIRIVYDIPTGIQGPEHPNPGKKFT
Predicted secondary structure






















































SS confidence





































































Known secondary structure (DSSP) TS

SS
TTT








S
S


TT
TT






TTSSSTTSB
 .........150.........160.........170.........180.........190.........200.........210
Sequence ARGFPRHCYLPNNEKGRKVLRLLITAWERRLIFTIGTSNTTGESDTVVWNEIHHKTEFGSNLTGHGYPDA
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP)

S
SSSTT
S

TTT

SS
SS




SS

TTSSSS

T
 .........220.......
Sequence SYLDNVLAELTAQGVSE
Predicted secondary structure




SS confidence
















Known secondary structure (DSSP) TTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D