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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6xgqC_

Fold library idPDB HeaderMoleculeTitle
c6xgqC_3.80PDB header: virusChain: C: PDB Molecule: ysd1_17;


Added to library: Sat Jul 4 08:33:53 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AGLYTTYQLLEVQRKLKTLPAFFLQWFPRQINFQEDMIAFDKVIQDVTRVAPFVAPNVQGRVIKESGYNT
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SGGGS


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 .........80.........90.........100.........110.........120.........130.........140
Sequence KTFKPAYVKPKHVIDPNMIIPRQPGEALGTGTLSIAQRRDRVIAYLLMKHRAMHENTWEWMAAQAAQYGY
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B


SS

SSS
SSS

S
TTTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VDVQGQDYPLVRVDFGRDAALTMTTDWTAAGVTLMDMIADLRDGQRLVSDKSMSGTVIRDYVFGGDAWDQ
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TTS

SSSTT

TT
SS





 .........220.........230.........240.........250.........260.........270.........280
Sequence FVKVGGKELWGKDGLMDSTIRGSETNVTRLWDDVEGVQYMGELVGANGAGRMRIWVNTQKYRDQNDQEQF
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Known secondary structure (DSSP) TTTSSSTTSSS
SSSTT





S




SS



SSS
S




TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LMKQKAVMGISSAIEGVRCFGAILDKGAGYQALDYFPKMWDQEDPSVEYLMSQGAPLMVPADPNASFLLT
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Known secondary structure (DSSP) SS
TT

GGG






TGGGS


S
TTTTB

SSTTS
 ...
Sequence VMS
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Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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