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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6xf9A_

Fold library idPDB HeaderMoleculeTitle
c6xf9A_2.22PDB header: viral proteinChain: A: PDB Molecule: packaging protein ul32;


Added to library: Sat Feb 27 08:20:12 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FVPWQLGTITRHRDELQKLLAASLLPEHPEESLGNPIMTQIHQSLQPSSPCRVCQLLFSLVRPMGFFEDY
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Known secondary structure (DSSP)

SS
TTTS
BS
GGGSS

TSTTS

TT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ACLCFFCLYAPHCWTSTMAAAADLCEIMHLHFPEEEATYGLFGPGRLMGIDLQLHFFVQKCFKTTAAEKI
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Known secondary structure (DSSP) TS
SS
SS
GGGSS
BSTTSB
TTS
TTS


GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence LGISNLQFLKSEFIRGMLTGTIFKTSWPTPCCQITDTTTAPASGIPELARATFCGASRPTKPSLLPALID
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Known secondary structure (DSSP) SB

TTT



SSSSS
TTS



SS

STTS
B


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence IWSTSSELLDPFFSPPLQADTSQGPCLMHPTLGLRYKNGTASVCLLCECLAAHPEAPKALQTLQCEVMGH
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Known secondary structure (DSSP) SBSTT






TTB
TTB
SGGGSTTSS

TTSS

TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence IENNVKLVDRIAFVLDNPFAMPYVSDPLLRELIRGCTPQEIHKHLFCDPLCALNAKVVSEDVLFRLPREQ
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Known secondary structure (DSSP)

S


STT

TT


S
T


B


 .........360.........370.........380.........390.........400.........410.........420
Sequence EYKKLRASAAAGQLLDANTLFDCEVVQTLVFLFKGLQNARVGKTTSLDIIRELTAQLKRHRLDLAHPSQT
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Known secondary structure (DSSP) TT
S
S

SS


SSB

TT


S
 .....
Sequence SHLYA
Predicted secondary structure


SS confidence




Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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