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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6x68D_

Fold library idPDB HeaderMoleculeTitle
c6x68D_3.66PDB header: dna binding protein/dnaChain: D: PDB Molecule: transposase;


Added to library: Sat Jul 25 08:28:54 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SQRGPTRMCRNIYDPLLCFKLFFTDEIISEIVKWTNAEISLKRRESMTGATFRDTNEDEIYAFFGILVMT
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Known secondary structure (DSSP)

S
GGGTT


TTS


TT

SGGG



 .........80.........90.........100.........110.........120.........130.........140
Sequence AVRKDNHMSTDDLFDRSLSMVYVSVMSRDRFDFLIRCLRMDDKSIRPTLRENDVFTPVRKIWDLFIHQCI
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Known secondary structure (DSSP) T
TTS
T
TTT
STTTTT



SS
TTTTTT
TTGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence QNYTPGAHLTIDEQLLGFRGRCPFRMYIPNKPSKYGIKILMMCDSGTKYMINGMPYLGRGTQTNGVPLGE
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Known secondary structure (DSSP) TS

S

S

TT

SSSSSSTTTT

SSS


TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence YYVKELSKPVRGSCRNITCDNWFTSIPLAKNLLQEPYKLTIVGTVRSNKREIPEVLKNSRSRPVGTSMFC
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Known secondary structure (DSSP) TGGGTTS

GGG

TBSSS
B

TT
TTS
GGGG
TTT

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FDGPLTLVSYKPKPAKMVYLLSSCDEDASINESTGKPQMVMYYNQTKGGVDTLDQMCSVMTCSRKTNRWP
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Known secondary structure (DSSP) TT

STT



S


B
TTT

BTTS





S
 .........360.........370.........380.........390.........400.........410.........420
Sequence MALLYGMINIACINSFIIYSHNVSSKGEKVQSRKKFMRNLYMSLTSSFMRKRLEAPTLKRYLRDNISNIL
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Known secondary structure (DSSP) TTT




TT
TT

S
 .........430.........440.........450.........460.........470........
Sequence PNEVPGTSDDSTEEPVTKKRTYCTYCPSKIRRKANASCKKCKKVICREHNIDMCQSCF
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Known secondary structure (DSSP)



TTTT









S

B
TTS
TTT

B


TTT


TTTS
SS
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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