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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6x02A_

Fold library idPDB HeaderMoleculeTitle
c6x02A_6.38PDB header: structural proteinChain: A: PDB Molecule: nucleoporin nup84;


Added to library: Mon Jan 4 13:07:25 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YQTERFTKFSDTLKEFKIEQDPFNIIREFRSAAGQLALDLANSGDESNVISSKDWELEARFWHLVELLLV
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Known secondary structure (DSSP)

S



TTTTSSS
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence FRNADLDLDDNKQLYQIWIVMVWLKENTYVMERPKNVPTSKWLNSNVLDVKDKEEDHIFFKYIYELILAG
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Known secondary structure (DSSP) TT







SSTSS






SS

SSS
S



S
TTGGGT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AIDEALEEAKLSDNISICMILCGIQEYLNPVIDTKHSLWRRTVYSLSQQAGLDPYERAIYSYLSGAIPNQ
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Known secondary structure (DSSP)
TT
GGG


TTTTTTTSS


T



G
 .........220.........230.........240.........250.........260.........270.........280
Sequence EVLQYSDWESDLHIHLNQILQTEIENYLLENNQVGTDELILPLPSHALTVQEVLNRVASRHPSESEHPIR
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Known secondary structure (DSSP) GGTSSS
TTGGGTSS
STT

S







ST
TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VLMASVILDSLPSVIHSSVEMLLDDKPYLLRIVTHLAICLDIINPGSVEEVDKSKLITTYISLLKLQGLY
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Known secondary structure (DSSP) TTTTT

TTTTTTSSS
TT


STT
S
TTTTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ENIPIYATFLNESDCLEACSFILSSLEDPQVRKKQIETINFLRLPASNILRRTTQRVFDETEQEYSPSNE
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Known secondary structure (DSSP)
TTGGGTT
TTTTTTTSTTSSGGGT
SS
STT
TT

STSTTTTGGGGGGS
TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence ISISFDVNNIDMHLIYGVEWLIEGKLYVDAVHSIIALSRRFLLNGRVKALEQFMERNNIGEICKNYELEK
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Known secondary structure (DSSP)



TTTTGGG


SSTTTTTTTTTGGGSTTT
SSS
TT
SSTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence IADNISKDENEDQFLEEITQYEHLIKGIREYEEWQKSVSLLSSESNIPTLIEKLQGFSKDTFELIKTFLV
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Known secondary structure (DSSP) TS

S
TTTTTTTTTTT
T
 .........570.........580.........590.........600.........610.........620.........630
Sequence DLTSSNFADSADYEILYEIRALYTPFLLMELHKKLVEAAKLLKIPKFISEALAFTSLVANENDKIYLLFQ
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Known secondary structure (DSSP) GGG
S

S
TSSGGGTSGGGTTTSTTTTGGGTSTTTTTTTT
 .........640.........650
Sequence SSGKLKEYLDLVARTATLSN
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Known secondary structure (DSSP) TT

SGGGGT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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