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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6womA_

Fold library idPDB HeaderMoleculeTitle
c6womA_2.15PDB header: ligaseChain: A: PDB Molecule: aspartate--trna ligase;


Added to library: Sat May 16 08:34:22 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HMFRTHTNGELSLKNLNEEVTLSGWVQTIRDKGFMIWIDLRDRYGITQLVFDQDRSSAALLEEAKKLGRE
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Known secondary structure (DSSP)



SS
TTS

GGGTT
TTTT
GGGS
TT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FVIQVSGKVIERASKNPKIPTGEIEILVEKLTILNNSELPPFTIEDETDGGEELRMKYRYLDIRRNPVKE
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Known secondary structure (DSSP)

SS

TTSTTTT




SS

SSS
S

TTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KLIFRHKIAQKVRNYLSDQGFIEVETPVLIKSTPEGARDFVVPSRMNPGQFYALPQSPQTFKQLLMVGGM
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Known secondary structure (DSSP) TT




SSB


SSSS



SSSTT


S
STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQEDVMNIFEGLTQNLLKDIAGQEFGKFPRMTFAEAM
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Known secondary structure (DSSP)


S


SS

SS

SS





 .........290.........300.........310.........320.........330.........340.........350
Sequence KKYGNDKPDIRFGMEFHELNDLVKGKDFKIFDEAELVVGINVEGCAEYTRKQIDELTDWIKRPQIGATGM
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Known secondary structure (DSSP) SSSS


SS




TTSS

STT
TT

STTT




 .........360.........370.........380.........390.........400.........410.........420
Sequence VWIKYQADGIVTSSVNKFYNEEDLKKIAEEFGAKPGDLMLVLSGNENKVRAQLSALRMELGNRLGLRKGN
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Known secondary structure (DSSP)
TTS
S
TTT

T

TT
STT


TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence EFAPLWVIDFPLLEWDEDTQRYHAMHHPFTSPKPEDIHLLENEAGKARANAYDLVINGNEIGGGSIRIFD
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Known secondary structure (DSSP)




BSTTTTSS
TTB
B
GGGGGGTTT
GGG
BBSTT


 .........500.........510.........520.........530.........540.........550.........560
Sequence KDLQAQMFSLLGFTPEEAEAQFGFLMNAFKYGAPPHGGLAFGFDRLVAVLDGNEVIRDYIAFPKNNSGRD
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Known secondary structure (DSSP) TT

TTT


TT



GGGSSS


TTS
B
 .........570.........580...
Sequence VMIDAPASIANEQLDELALTINI
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Known secondary structure (DSSP) TTTTBS



T





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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