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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6wm3P_

Fold library idPDB HeaderMoleculeTitle
c6wm3P_3.40PDB header: membrane proteinChain: P: PDB Molecule: v-type proton atpase subunit h;


Added to library: Sat Nov 14 08:46:26 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTEGSQCAKTFINLMTHICK
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Known secondary structure (DSSP)
TTSTTSSGGGTTTTS
SS

STTTTTTSSSTTGGGSTT
STTSSTTTT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence EQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPMLNRQDPFTVHMAARIIAKLAAWGKELM
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Known secondary structure (DSSP) SSTTT

GGGTT
GGGTTTTSSS
STTSGGG

S
SS
GGGSSSS

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence EGSDLNYYFNWIKTQLSSSQYVQCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVLSNKCGFQLQYQMIFS
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Known secondary structure (DSSP)
SSS
SSGGGS


TTSSS
S


 .........220.........230.........240.........250.........260.........270.........280
Sequence IWLLAFSPQMCEHLRRYNIIPVLSDILQESVKEKVTRIILAAFRNFLEKSTERETRQEYALAMIQCKVLK
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Known secondary structure (DSSP)
S
TSS

T


SS
SSTTGGGTTS

 .........290.........300.........310.........320.........330.........340.........350
Sequence QLENLEQQKYDDEDISEDIKFLLEKLGESVQDLSSFDEYSSELKSGRLEWSPVHKSEKFWRENAVRLNEK
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Known secondary structure (DSSP) S

S


T




TTTT
S
GGGGS
G
 .........360.........370.........380.........390.........400.........410.........420
Sequence NYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYPRGKRVIEQLGGKQLVMNHMHHEDQQVRYNALLAV
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Known secondary structure (DSSP) GGT


T
STTT
S
 .......
Sequence QKLMVHN
Predicted secondary structure


SS confidence






Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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