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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6wimA_

Fold library idPDB HeaderMoleculeTitle
c6wimA_2.60PDB header: membrane proteinChain: A: PDB Molecule: outer membrane transporter cdib;


Added to library: Sat Nov 7 08:45:09 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SMAMLSPGDRSAIQQQQQQLLDENQRQRDALERSAPLTITPETSAGTEGPCFTVSSIVVSGATRLTSAET
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Known secondary structure (DSSP)

S


TS













S




TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DRLVAPWVNQCLNITGLTAVTDAMTDSYIRRGYITSRAFLTEQDLSGGVLHITVMEGRLQQIRAEGADLP
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Known secondary structure (DSSP) GGGTT
TT
TT

S


TTS


GGGT

 .........150.........160.........170.........180.........190.........200.........210
Sequence ARTLKMVFPGMEGKVLNLRDIEQGMEQINRLRTEPVQIEISPGDREGWSVVTLTALPEWPVTGSVGIDNS
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Known secondary structure (DSSP) STT
TTSB

TT
SS


SSTT




SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GQKSTGTGQLNGVLSFNNPLGLADNWFVSGGRSSDFSVSHDARNFAAGVSLPYGYTLVDYTYSWSDYLST
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Known secondary structure (DSSP) SBTTTBS
STTSSS
TT

SSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence IDNRGWRWRSTGDLQTHRLGLSHVLFRNGDMKTALTGGLQHRIIHNYLDDVLLQGSSRKLTSFSVGLNHT
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Known secondary structure (DSSP)
TTS

TTTT
TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence HKFLGGVGTLNPVFTRGMPWFGAESDHGKRGDLPVNQFRKWSVSASFQRPVTDRVWWLTSAYAQWSPDRL
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Known secondary structure (DSSP) TT


TT




S

SS


SS
SSSS
SS

 .........430.........440.........450.........460.........470.........480.........490
Sequence HGVEQLSLGGESSVRGFKDQYISGNNGGYLRNELSWSLFSLPYVGTVRAVAALDGGWLHSDSDDPYSSGT
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Known secondary structure (DSSP)
STT


SSSSSTT
SS


SS
SSS



S
GGG
 .........500.........510.........520.........530......
Sequence LWGAAAGLSTTSGHVSGSFTAGLPLVYPDWLAPDHLTVYWRVAVAF
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Known secondary structure (DSSP) TT

SS



S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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