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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6whgB_

Fold library idPDB HeaderMoleculeTitle
c6whgB_3.10PDB header: membrane proteinChain: B: PDB Molecule: calcium channel yvc1;


Added to library: Sat Apr 24 08:41:58 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GFEAPTPRQILRVTLNLKYLIDKVVPIVYILSPKVVKLAYEACGGNPKDKANKRKYQSVIIFSLLKVCEW
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Known secondary structure (DSSP)

S




S




TT


TT
SSSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YSILATMEVHNAKLYETRNLASQQLCKLLIEREETRDLQFLFMQLLLRRYVINENDEDQEPLNALELATD
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Known secondary structure (DSSP)
STT
TTTT

B


SSSS



B
 .........150.........160.........170.........180.........190.........200.........210
Sequence MHCTTVIGSSGFQRCLKWIWRGWIVQNGLDPTTFIKDDSLAFNPVRLKAPVYQNYLQMIFSFLFLGLYTL
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Known secondary structure (DSSP) TT
TSTTSB


SS
TT


B






SGGGGST
 .........220.........230.........240.........250.........260.........270.........280
Sequence VVNGKDSERVQSFDLLESIFYVFNTGFILDELTKLYYIGYAHLSFWNLFNDTTYLIITFAMGFRAMSVTP
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Known secondary structure (DSSP) TTT


SSS




S
SS




 .........290.........300.........310.........320.........330.........340.........350
Sequence YSSEDWDKISYRVLSCAAPFVWSRLLLYLESQRFIGIMLVILKHMMKESIVFFFLLFLIMIGFTQGFLGL
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Known secondary structure (DSSP)

TTGGGGGGTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence DSADGKRDITGPILGNLTITVLGLGSFDVFEEFAPPYAAILYYGYYFIVSVILLNILIALYSTAYQKVID
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Known secondary structure (DSSP) SSS

SGGGT


TTTTTTT
SSTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence NADDEYMALMSQKTLRYIRKDLSYTVMTIVYSPFLLLISVKETREARRIKYNRMKRLNDDANEYDTPWDL
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Known secondary structure (DSSP) TTT

TT

SSS
SS

SS
S
 .........500.........510.........520...
Sequence TDGYLDDNRNSGMRATQLKNSRSLKLQRTAEQE
Predicted secondary structure

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Known secondary structure (DSSP) S
S



TTSTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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