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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6wcdA_

Fold library idPDB HeaderMoleculeTitle
c6wcdA_1.54PDB header: hydrolaseChain: A: PDB Molecule: dna-(apurinic or apyrimidinic site) lyase;


Added to library: Sat May 9 08:23:36 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKIVSWNINGIRATRVGLKETLDSLDADIICLQETKVTRDLLDEPSAIVEGYNSYFSFSRVRSGYSGVAT
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Known secondary structure (DSSP)

S
TGGG
S


S




GGG



TT


SSSTT


 .........80.........90.........100.........110.........120.........130.........140
Sequence FCKSSTTPQAAEEGLSGVFCTGSVGCYGNTEQFLEEELQSLDQEGRAVLTQHRILNCEDKEETLTVINVY
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Known secondary structure (DSSP)
GGG

SSSSSTT










TTS
TTS

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence CPRADPEKPERKTYKLRFYHLLQTRAEAILQNGGHVIILGDVNTSHRPLDHCDPTDLTFEENPGRQWLNQ
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Known secondary structure (DSSP)




TT
TTSS
S


SGGGB
S




GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence FLGDPSGLFYDSFRYFHPTQKNAFTCWCSASGARQTNYGTRIDYILGNRELVESEFLDSVIMPEVEGSDH
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Known secondary structure (DSSP) B




S
TT
SS



SSTTT



TT

SSSB
 .........290.........300.........310....
Sequence CPVKAFMKCQPIAANKCPPLCTKYLPEFAGRQQK
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Known secondary structure (DSSP)





SS

TTSGGG
GGGS
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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