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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6wc4A_

Fold library idPDB HeaderMoleculeTitle
c6wc4A_5.73PDB header: transport proteinChain: A: PDB Molecule: protein transport protein sec39;


Added to library: Sat May 30 08:25:01 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXERLQYLKLLCVMWPELDAPTNISFVXXXXXXXXXXXXXXXXXXXDV
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Known secondary structure (DSSP)





S
TTS
GGGGTT





 .........80.........90.........100.........110.........120.........130.........140
Sequence NTISKRVNALASYVEETLIGFNDFIRARTLVVNSLSKDALCSLELLANSKSLVSWLDGILKPLDHLNRRL
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Known secondary structure (DSSP) TT


TT
TT
TTTT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence DTKLSIFQFENLSAQDAVSEMWKLVVRSMMKYEVEPYLKFQGTPFYEVIFNPDNFPLDSINNFQIYKYLS
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Known secondary structure (DSSP) T



S


TT

SSTTT



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence SQPTPLDNETKWNILYSNGKNLASILPNLVFELESLIKSFSGISLNEWLVNLKFMNAMLKSLKKLDSVVQ
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Known secondary structure (DSSP) TTTTT

T

T


T





 .........290.........300.........310.........320.........330.........340.........350
Sequence TSYFSIITQNMFIDIKTVQNVVEFIESSTNELQTSILLESLLKLGKFDILEQFVVKIQDKVIIQHFWRFF
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Known secondary structure (DSSP)


TTT

TT


 .........360.........370.........380.........390.........400.........410.........420
Sequence NILSDPDMKNANRTLNLLSNKSNLYDILTIVDRLSHYPFKPAHISEFKANPMEIVEKLLDLNPKLRKNIE
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Known secondary structure (DSSP)


S

TT



TTT
TSTTGGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence VTFDILKELYTALQVTKDFTKEYSKLLSEHINNLLANGDFKFAFDQAINLIERPEHWVTIFQVGKYIDPN
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Known secondary structure (DSSP) TT


TTT







TT
 .........500.........510.........520.........530.........540.....
Sequence WLDAEIPTEIIYLQLGIVSKLLHICPEKEYEVITSQWSGLELELSTRNLISDKYS
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Known secondary structure (DSSP) SGGG


S
GGGTTS
STT
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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